Difference between revisions of "TSS:Hg 108140.1"
From referenceTSS
| Line 4: | Line 4: | ||
|IMD41= | |IMD41= | ||
|TCGFR= | |TCGFR= | ||
| − | |all_trans=ENST00000379954.5 | + | |all_trans=ENST00000379954.5:0 X01057:0 K03122:0 AK223313:8 ENST00000256876.10:10 ENST00000379959.8:-52 NM_001308243:-52 NM_001308242:-52 NM_000417:-52 AK313847:-52 ENST00000644262.1:-55 BC156627:149 BC152889:149 AB528862:149 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=60 |
|end=6062315 | |end=6062315 | ||
|end_of_center_position=6062308 | |end_of_center_position=6062308 | ||
|entrez_id=3559 | |entrez_id=3559 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
| − | |gene_alias=CD25 | + | |gene_alias=CD25{{!}}IDDM10{{!}}IL2R{{!}}IMD41{{!}}TCGFR{{!}}p55 |
|gene_description=interleukin 2 receptor subunit alpha | |gene_description=interleukin 2 receptor subunit alpha | ||
|gene_id=3559 | |gene_id=3559 | ||
| Line 23: | Line 23: | ||
|hgnc_mgi_id=HGNC:6008 | |hgnc_mgi_id=HGNC:6008 | ||
|nearest_ensembl=ENSG00000134460 | |nearest_ensembl=ENSG00000134460 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001308242 |
|nearest_refseq=NM_000417 | |nearest_refseq=NM_000417 | ||
|nearest_unigene=Hs.231367 | |nearest_unigene=Hs.231367 | ||
| − | |num_trans= | + | |num_trans=14 |
|p55= | |p55= | ||
|species=human | |species=human | ||
| Line 32: | Line 32: | ||
|start_of_center_position=6062307 | |start_of_center_position=6062307 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000379954.5 | + | |transcript_name=ENST00000379954.5 X01057 K03122 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_108140.1 | |tss_id=hg_108140.1 | ||
Revision as of 19:17, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6062307 |
|---|---|
| End of the center position in the TSS region: | 6062308 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000379954.5 X01057 K03122 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENST00000379954.5:0 X01057:0 K03122:0 AK223313:8 ENST00000256876.10:10 ENST00000379959.8:-52 NM_001308243:-52 NM_001308242:-52 NM_000417:-52 AK313847:-52 ENST00000644262.1:-55 BC156627:149 BC152889:149 AB528862:149 |
TATA-Box annotation
| Distance to TSS: | 60 |
|---|---|
| Nearest PromoterID: | NM_001308242 |
| Entrez ID: | 3559 |
| Nearest Unigene: | Hs.231367 |
| Nearest Refseq: | NM_000417 |
| Nearest Ensembl: | ENSG00000134460 |
| Gene Name: | interleukin 2 receptor subunit alpha |
| Gene Alias: | CD25|IDDM10|IL2R|IMD41|TCGFR|p55 |
| Gene Description: | interleukin 2 receptor subunit alpha |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
