Difference between revisions of "TSS:Hg 109096.1"
From referenceTSS
| Line 9: | Line 9: | ||
|SE2-5LT1= | |SE2-5LT1= | ||
|SE2-5T2= | |SE2-5T2= | ||
| − | |all_trans=BC071566:-62 AF196185:-73 AF196186:-73 ENST00000374789. | + | |all_trans=BC071566:-62 AF196185:-73 AF196186:-73 ENST00000374789.8:-86 ENST00000374788.8:-86 ENST00000346874.9:-86 ENST00000374794.8:-86 ENST00000350537.9:-86 ENST00000374790.8:-86 ENST00000374776.6:-86 ENST00000374773.6:-86 NM_001184787:-86 NM_001184785:-86 NM_001184789:-86 NM_001184791:-86 NM_001184788:-86 NM_019619:-86 NM_001184794:-86 NM_001184793:-86 ENST00000545260.5:-115 ENST00000545693.5:-115 ENST00000340077.9:-115 NM_001184786:-115 NM_001184790:-115 NM_001184792:-115 AF454058:-115 AB073671:209 AF252293:209 AF332593:209 AF467002:209 AF467003:209 AF467004:209 AF467005:209 AF467006:209 AF332592:209 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.185 | |cpg_percent=0.185 | ||
|distance=-62 | |distance=-62 | ||
| − | |distance_to_tss= | + | |distance_to_tss=89 |
|end=34815210 | |end=34815210 | ||
|end_of_center_position=34815207 | |end_of_center_position=34815207 | ||
|entrez_id=56288 | |entrez_id=56288 | ||
|gc_percent=0.840796 | |gc_percent=0.840796 | ||
| − | |gene_alias=ASIP | + | |gene_alias=ASIP{{!}}Baz{{!}}PAR3{{!}}PAR3alpha{{!}}PARD-3{{!}}PARD3A{{!}}PPP1R118{{!}}SE2-5L16{{!}}SE2-5LT1{{!}}SE2-5T2 |
|gene_description=par-3 family cell polarity regulator | |gene_description=par-3 family cell polarity regulator | ||
|gene_id=56288 | |gene_id=56288 | ||
| Line 28: | Line 28: | ||
|hgnc_mgi_id=HGNC:16051 | |hgnc_mgi_id=HGNC:16051 | ||
|nearest_ensembl=ENSG00000148498 | |nearest_ensembl=ENSG00000148498 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001184785 |
|nearest_refseq=NM_019619 | |nearest_refseq=NM_019619 | ||
|nearest_unigene=Hs.131489 | |nearest_unigene=Hs.131489 | ||
| − | |num_trans= | + | |num_trans=35 |
|species=human | |species=human | ||
|start=34815203 | |start=34815203 | ||
Revision as of 19:39, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 34815206 |
|---|---|
| End of the center position in the TSS region: | 34815207 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC071566 |
|---|---|
| Distance: | -62 |
| Num_trans: | 35 |
| All_trans: | BC071566:-62 AF196185:-73 AF196186:-73 ENST00000374789.8:-86 ENST00000374788.8:-86 ENST00000346874.9:-86 ENST00000374794.8:-86 ENST00000350537.9:-86 ENST00000374790.8:-86 ENST00000374776.6:-86 ENST00000374773.6:-86 NM_001184787:-86 NM_001184785:-86 NM_001184789:-86 NM_001184791:-86 NM_001184788:-86 NM_019619:-86 NM_001184794:-86 NM_001184793:-86 ENST00000545260.5:-115 ENST00000545693.5:-115 ENST00000340077.9:-115 NM_001184786:-115 NM_001184790:-115 NM_001184792:-115 AF454058:-115 AB073671:209 AF252293:209 AF332593:209 AF467002:209 AF467003:209 AF467004:209 AF467005:209 AF467006:209 AF332592:209 |
TATA-Box annotation
| Distance to TSS: | 89 |
|---|---|
| Nearest PromoterID: | NM_001184785 |
| Entrez ID: | 56288 |
| Nearest Unigene: | Hs.131489 |
| Nearest Refseq: | NM_019619 |
| Nearest Ensembl: | ENSG00000148498 |
| Gene Name: | par-3 family cell polarity regulator |
| Gene Alias: | ASIP|Baz|PAR3|PAR3alpha|PARD-3|PARD3A|PPP1R118|SE2-5L16|SE2-5LT1|SE2-5T2 |
| Gene Description: | par-3 family cell polarity regulator |
| Gene Type: | protein-coding |
| CpG%: | 0.185 |
| GC%: | 0.840796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
