Difference between revisions of "TSS:Hg 111738.1"
From referenceTSS
| Line 11: | Line 11: | ||
|TK14= | |TK14= | ||
|TK25= | |TK25= | ||
| − | |all_trans=ENST00000369060.8:43 ENST00000359354.6 | + | |all_trans=ENST00000369060.8:43 ENST00000359354.6:43 M87771:43 ENST00000336553.10:-45 M35718:-47 ENST00000457416.6:-52 M97193:-52 BC096749:-59 ENST00000604236.5:-62 ENST00000360144.7:-81 AK026508:-81 ENST00000358487.10:-93 NM_000141:-93 NM_001144917:-93 NR_073009:-93 NM_001144918:-93 NM_001320658:-93 NM_001144919:-93 ENST00000369059.5:-101 ENST00000613048.4:-107 ENST00000356226.8:-107 ENST00000369058.7:107 NM_022970:-107 AB030073:107 BC039243:-107 M80634:107 AB030075:107 AB030074:107 AB030076:107 AB030077:107 AB030078:107 M87772:255 M87770:257 ENST00000490349.5:269 U11814:269 X52832:351 ENST00000636922.1:375 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
|distance=43 | |distance=43 | ||
| − | |distance_to_tss= | + | |distance_to_tss=98 |
|end=121598351 | |end=121598351 | ||
|end_of_center_position=121598346 | |end_of_center_position=121598346 | ||
|entrez_id=2263 | |entrez_id=2263 | ||
|gc_percent=0.820896 | |gc_percent=0.820896 | ||
| − | |gene_alias=BBDS | + | |gene_alias=BBDS{{!}}BEK{{!}}BFR-1{{!}}CD332{{!}}CEK3{{!}}CFD1{{!}}ECT1{{!}}JWS{{!}}K-SAM{{!}}KGFR{{!}}TK14{{!}}TK25 |
|gene_description=fibroblast growth factor receptor 2 | |gene_description=fibroblast growth factor receptor 2 | ||
|gene_id=2263 | |gene_id=2263 | ||
| Line 30: | Line 30: | ||
|hgnc_mgi_id=HGNC:3689 | |hgnc_mgi_id=HGNC:3689 | ||
|nearest_ensembl=ENSG00000066468 | |nearest_ensembl=ENSG00000066468 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_073009 |
|nearest_refseq=NM_000141 | |nearest_refseq=NM_000141 | ||
|nearest_unigene=Hs.533683 | |nearest_unigene=Hs.533683 | ||
| − | |num_trans= | + | |num_trans=37 |
|species=human | |species=human | ||
|start=121598340 | |start=121598340 | ||
|start_of_center_position=121598345 | |start_of_center_position=121598345 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000369060.8 ENST00000359354.6 | + | |transcript_name=ENST00000369060.8 ENST00000359354.6 M87771 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_111738.1 | |tss_id=hg_111738.1 | ||
Revision as of 20:40, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 121598345 |
|---|---|
| End of the center position in the TSS region: | 121598346 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000369060.8 ENST00000359354.6 M87771 |
|---|---|
| Distance: | 43 |
| Num_trans: | 37 |
| All_trans: | ENST00000369060.8:43 ENST00000359354.6:43 M87771:43 ENST00000336553.10:-45 M35718:-47 ENST00000457416.6:-52 M97193:-52 BC096749:-59 ENST00000604236.5:-62 ENST00000360144.7:-81 AK026508:-81 ENST00000358487.10:-93 NM_000141:-93 NM_001144917:-93 NR_073009:-93 NM_001144918:-93 NM_001320658:-93 NM_001144919:-93 ENST00000369059.5:-101 ENST00000613048.4:-107 ENST00000356226.8:-107 ENST00000369058.7:107 NM_022970:-107 AB030073:107 BC039243:-107 M80634:107 AB030075:107 AB030074:107 AB030076:107 AB030077:107 AB030078:107 M87772:255 M87770:257 ENST00000490349.5:269 U11814:269 X52832:351 ENST00000636922.1:375 |
TATA-Box annotation
| Distance to TSS: | 98 |
|---|---|
| Nearest PromoterID: | NR_073009 |
| Entrez ID: | 2263 |
| Nearest Unigene: | Hs.533683 |
| Nearest Refseq: | NM_000141 |
| Nearest Ensembl: | ENSG00000066468 |
| Gene Name: | fibroblast growth factor receptor 2 |
| Gene Alias: | BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 |
| Gene Description: | fibroblast growth factor receptor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.820896 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
