Difference between revisions of "TSS:Hg 111743.1"
From referenceTSS
| Line 11: | Line 11: | ||
|TK14= | |TK14= | ||
|TK25= | |TK25= | ||
| − | |all_trans=ENST00000613048.4:216 ENST00000356226.8 | + | |all_trans=ENST00000613048.4:216 ENST00000356226.8:216 NM_022970:216 BC039243:216 ENST00000369059.5:222 ENST00000358487.10:230 NM_000141:230 NM_001144917:230 NR_073009:230 NM_001144918:230 NM_001320658:230 NM_001144919:230 ENST00000360144.7:242 AK026508:242 ENST00000604236.5:261 BC096749:264 ENST00000457416.6:271 M97193:271 M35718:276 ENST00000336553.10:278 ENST00000369060.8:376 ENST00000359354.6:376 M87771:376 ENST00000369058.7:440 AB030073:440 M80634:440 AB030075:440 AB030074:440 AB030076:440 AB030077:440 AB030078:440 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| Line 20: | Line 20: | ||
|entrez_id=2263 | |entrez_id=2263 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
| − | |gene_alias=BBDS | + | |gene_alias=BBDS{{!}}BEK{{!}}BFR-1{{!}}CD332{{!}}CEK3{{!}}CFD1{{!}}ECT1{{!}}JWS{{!}}K-SAM{{!}}KGFR{{!}}TK14{{!}}TK25 |
|gene_description=fibroblast growth factor receptor 2 | |gene_description=fibroblast growth factor receptor 2 | ||
|gene_id=2263 | |gene_id=2263 | ||
| Line 30: | Line 30: | ||
|hgnc_mgi_id=HGNC:3689 | |hgnc_mgi_id=HGNC:3689 | ||
|nearest_ensembl=ENSG00000066468 | |nearest_ensembl=ENSG00000066468 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_000141 |
|nearest_refseq=NM_000141 | |nearest_refseq=NM_000141 | ||
|nearest_unigene=Hs.533683 | |nearest_unigene=Hs.533683 | ||
| − | |num_trans= | + | |num_trans=31 |
|species=human | |species=human | ||
|start=121598673 | |start=121598673 | ||
|start_of_center_position=121598680 | |start_of_center_position=121598680 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000613048.4 ENST00000356226.8 | + | |transcript_name=ENST00000613048.4 ENST00000356226.8 NM_022970 BC039243 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_111743.1 | |tss_id=hg_111743.1 | ||
Revision as of 20:40, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 121598680 |
|---|---|
| End of the center position in the TSS region: | 121598681 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000613048.4 ENST00000356226.8 NM_022970 BC039243 |
|---|---|
| Distance: | 216 |
| Num_trans: | 31 |
| All_trans: | ENST00000613048.4:216 ENST00000356226.8:216 NM_022970:216 BC039243:216 ENST00000369059.5:222 ENST00000358487.10:230 NM_000141:230 NM_001144917:230 NR_073009:230 NM_001144918:230 NM_001320658:230 NM_001144919:230 ENST00000360144.7:242 AK026508:242 ENST00000604236.5:261 BC096749:264 ENST00000457416.6:271 M97193:271 M35718:276 ENST00000336553.10:278 ENST00000369060.8:376 ENST00000359354.6:376 M87771:376 ENST00000369058.7:440 AB030073:440 M80634:440 AB030075:440 AB030074:440 AB030076:440 AB030077:440 AB030078:440 |
TATA-Box annotation
| Distance to TSS: | -223 |
|---|---|
| Nearest PromoterID: | NM_000141 |
| Entrez ID: | 2263 |
| Nearest Unigene: | Hs.533683 |
| Nearest Refseq: | NM_000141 |
| Nearest Ensembl: | ENSG00000066468 |
| Gene Name: | fibroblast growth factor receptor 2 |
| Gene Alias: | BBDS|BEK|BFR-1|CD332|CEK3|CFD1|ECT1|JWS|K-SAM|KGFR|TK14|TK25 |
| Gene Description: | fibroblast growth factor receptor 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
