Difference between revisions of "TSS:Hg 12625.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000354381.3 | + | |all_trans=ENST00000354381.3:-55 AK091941:-55 AB284127:-166 BC060866:-166 ENST00000371153.9:-188 NM_181712:-188 NM_001320269:-188 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
|dJ1078M7.1= | |dJ1078M7.1= | ||
|distance=-55 | |distance=-55 | ||
| − | |distance_to_tss= | + | |distance_to_tss=214 |
|end=62319246 | |end=62319246 | ||
|end_of_center_position=62319220 | |end_of_center_position=62319220 | ||
|entrez_id=163782 | |entrez_id=163782 | ||
|gc_percent=0.791045 | |gc_percent=0.791045 | ||
| − | |gene_alias=ANKRD38 | + | |gene_alias=ANKRD38{{!}}dJ1078M7.1 |
|gene_description=KN motif and ankyrin repeat domains 4 | |gene_description=KN motif and ankyrin repeat domains 4 | ||
|gene_id=163782 | |gene_id=163782 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_181712 | |nearest_refseq=NM_181712 | ||
|nearest_unigene=Hs.283398 | |nearest_unigene=Hs.283398 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=62319193 | |start=62319193 | ||
|start_of_center_position=62319219 | |start_of_center_position=62319219 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000354381.3 | + | |transcript_name=ENST00000354381.3 AK091941 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_12625.1 | |tss_id=hg_12625.1 | ||
Revision as of 02:17, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 62319219 |
|---|---|
| End of the center position in the TSS region: | 62319220 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000354381.3 AK091941 |
|---|---|
| Distance: | -55 |
| Num_trans: | 7 |
| All_trans: | ENST00000354381.3:-55 AK091941:-55 AB284127:-166 BC060866:-166 ENST00000371153.9:-188 NM_181712:-188 NM_001320269:-188 |
TATA-Box annotation
| Distance to TSS: | 214 |
|---|---|
| Nearest PromoterID: | NM_181712 |
| Entrez ID: | 163782 |
| Nearest Unigene: | Hs.283398 |
| Nearest Refseq: | NM_181712 |
| Nearest Ensembl: | ENSG00000132854 |
| Gene Name: | KN motif and ankyrin repeat domains 4 |
| Gene Alias: | ANKRD38|dJ1078M7.1 |
| Gene Description: | KN motif and ankyrin repeat domains 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.791045 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
