Difference between revisions of "TSS:Hg 13962.1"
From referenceTSS
| Line 9: | Line 9: | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=-10 | |distance=-10 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-10279 |
|end=114727057 | |end=114727057 | ||
|end_of_center_position=114727050 | |end_of_center_position=114727050 | ||
|entrez_id=4893 | |entrez_id=4893 | ||
|gc_percent=0.383085 | |gc_percent=0.383085 | ||
| − | |gene_alias=ALPS4 | + | |gene_alias=ALPS4{{!}}CMNS{{!}}N-ras{{!}}NCMS{{!}}NRAS1{{!}}NS6 |
| − | |gene_description= | + | |gene_description=NRAS proto-oncogene, GTPase |
|gene_id=7812 | |gene_id=7812 | ||
|gene_name=cold shock domain containing E1 | |gene_name=cold shock domain containing E1 | ||
| Line 32: | Line 32: | ||
|start_of_center_position=114727049 | |start_of_center_position=114727049 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=14(GCTTTTCAAGCC,+,0.00) |
|transcript_name=AK130392 | |transcript_name=AK130392 | ||
|tss_classification=no | |tss_classification=no | ||
Revision as of 07:27, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 114727049 |
|---|---|
| End of the center position in the TSS region: | 114727050 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK130392 |
|---|---|
| Distance: | -10 |
| Num_trans: | 1 |
| All_trans: | AK130392:-10 |
TATA-Box annotation
| Distance to TSS: | -10279 |
|---|---|
| Nearest PromoterID: | NM_002524 |
| Entrez ID: | 4893 |
| Nearest Unigene: | Hs.486502 |
| Nearest Refseq: | NM_002524 |
| Nearest Ensembl: | ENSG00000213281 |
| Gene Name: | cold shock domain containing E1 |
| Gene Alias: | ALPS4|CMNS|N-ras|NCMS|NRAS1|NS6 |
| Gene Description: | NRAS proto-oncogene, GTPase |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.383085 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 14(GCTTTTCAAGCC,+,0.00) |
