Difference between revisions of "TSS:Hg 143711.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000531609.1:92 NR_103769:92 | + | |all_trans=ENST00000662606.1:0 ENST00000660740.1:84 ENST00000531609.1:92 NR_103769:92 BX161428:92 ENST00000654548.1:182 |
|chr=chr14 | |chr=chr14 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=-98 | |distance_to_tss=-98 | ||
|end=65222451 | |end=65222451 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=long intergenic non-protein coding RNA 2324 |
|gene_id=100128233 | |gene_id=100128233 | ||
| − | |gene_name= | + | |gene_name=long intergenic non-protein coding RNA 2324 |
| − | |gene_source= | + | |gene_source=HGNC:53244 |
| − | |gene_symbol= | + | |gene_symbol=LINC02324 |
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |hgnc_mgi_id= | + | |hgnc_mgi_id=HGNC:53244 |
|nearest_ensembl=ENSG00000255002 | |nearest_ensembl=ENSG00000255002 | ||
|nearest_promoter_id=NR_103769 | |nearest_promoter_id=NR_103769 | ||
|nearest_refseq=NR_103769 | |nearest_refseq=NR_103769 | ||
|nearest_unigene=Hs.497323 | |nearest_unigene=Hs.497323 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=65222438 | |start=65222438 | ||
|start_of_center_position=65222444 | |start_of_center_position=65222444 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000662606.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_143711.1 | |tss_id=hg_143711.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 09:03, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 65222444 |
|---|---|
| End of the center position in the TSS region: | 65222445 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000662606.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000662606.1:0 ENST00000660740.1:84 ENST00000531609.1:92 NR_103769:92 BX161428:92 ENST00000654548.1:182 |
TATA-Box annotation
| Distance to TSS: | -98 |
|---|---|
| Nearest PromoterID: | NR_103769 |
| Entrez ID: | 100128233 |
| Nearest Unigene: | Hs.497323 |
| Nearest Refseq: | NR_103769 |
| Nearest Ensembl: | ENSG00000255002 |
| Gene Name: | long intergenic non-protein coding RNA 2324 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 2324 |
| Gene Type: | ncRNA |
| CpG%: | 0.035 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
