Difference between revisions of "TSS:Hg 147554.1"
From referenceTSS
| Line 3: | Line 3: | ||
|RNR= | |RNR= | ||
|RP37= | |RP37= | ||
| − | |all_trans=ENST00000617575. | + | |all_trans=ENST00000617575.5:0 NM_014249:0 NM_016346:0 AF121129:0 ENST00000621098.1:7 AF148128:7 HQ692847:159 AB307710:159 |
|chr=chr15 | |chr=chr15 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=9 |
|end=71810585 | |end=71810585 | ||
|end_of_center_position=71810564 | |end_of_center_position=71810564 | ||
|entrez_id=10002 | |entrez_id=10002 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias=ESCS | + | |gene_alias=ESCS{{!}}PNR{{!}}RNR{{!}}RP37{{!}}rd7 |
|gene_description=nuclear receptor subfamily 2 group E member 3 | |gene_description=nuclear receptor subfamily 2 group E member 3 | ||
|gene_id=10002 | |gene_id=10002 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_014249 | |nearest_refseq=NM_014249 | ||
|nearest_unigene=Hs.187354 | |nearest_unigene=Hs.187354 | ||
| − | |num_trans= | + | |num_trans=8 |
|rd7= | |rd7= | ||
|species=human | |species=human | ||
| Line 31: | Line 31: | ||
|start_of_center_position=71810563 | |start_of_center_position=71810563 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000617575. | + | |transcript_name=ENST00000617575.5 NM_014249 NM_016346 AF121129 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_147554.1 | |tss_id=hg_147554.1 | ||
Revision as of 10:32, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 71810563 |
|---|---|
| End of the center position in the TSS region: | 71810564 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000617575.5 NM_014249 NM_016346 AF121129 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENST00000617575.5:0 NM_014249:0 NM_016346:0 AF121129:0 ENST00000621098.1:7 AF148128:7 HQ692847:159 AB307710:159 |
TATA-Box annotation
| Distance to TSS: | 9 |
|---|---|
| Nearest PromoterID: | NM_016346 |
| Entrez ID: | 10002 |
| Nearest Unigene: | Hs.187354 |
| Nearest Refseq: | NM_014249 |
| Nearest Ensembl: | ENSG00000278570 |
| Gene Name: | nuclear receptor subfamily 2 group E member 3 |
| Gene Alias: | ESCS|PNR|RNR|RP37|rd7 |
| Gene Description: | nuclear receptor subfamily 2 group E member 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
