Difference between revisions of "TSS:Hg 155070.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000568925 | + | |all_trans=ENST00000568925.1:-33 ENST00000563157.1:101 BC035731:-166 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
|distance=-33 | |distance=-33 | ||
| − | |distance_to_tss= | + | |distance_to_tss=13058 |
|end=77212492 | |end=77212492 | ||
|end_of_center_position=77212467 | |end_of_center_position=77212467 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001129979 | |nearest_refseq=NM_001129979 | ||
|nearest_unigene=Hs.734779 | |nearest_unigene=Hs.734779 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=77212440 | |start=77212440 | ||
|start_of_center_position=77212466 | |start_of_center_position=77212466 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000568925 | + | |transcript_name=ENST00000568925.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_155070.1 | |tss_id=hg_155070.1 | ||
Revision as of 13:25, 16 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 77212466 |
|---|---|
| End of the center position in the TSS region: | 77212467 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000568925.1 |
|---|---|
| Distance: | -33 |
| Num_trans: | 3 |
| All_trans: | ENST00000568925.1:-33 ENST00000563157.1:101 BC035731:-166 |
TATA-Box annotation
| Distance to TSS: | 13058 |
|---|---|
| Nearest PromoterID: | NM_001129979 |
| Entrez ID: | 100130958 |
| Nearest Unigene: | Hs.734779 |
| Nearest Refseq: | NM_001129979 |
| Nearest Ensembl: | ENSG00000205078 |
| Gene Name: | synaptonemal complex central element protein 1 like |
| Gene Alias: | MRP2 |
| Gene Description: | synaptonemal complex central element protein 1 like |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
