Difference between revisions of "TSS:Hg 157190.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000669868.1:0 ENST00000667946.1:-101 ENST00000656785.1:-124 ENST00000562591.1:-345 BC038761:-345 ENST00000666603.1:-366 ENST00000664405.1:-370 ENST00000653340.1:-370 ENST00000658117.1:399 ENST00000662587.1:-450 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=1056 | |distance_to_tss=1056 | ||
|end=35506117 | |end=35506117 | ||
| + | |end_of_center_position=35506114 | ||
|entrez_id=100130700 | |entrez_id=100130700 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=TP53 target 3 family member H, pseudogene |
|gene_id=100130700 | |gene_id=100130700 | ||
| − | |gene_name= | + | |gene_name=TP53TG3HP |
|gene_source=HGNC:51819 | |gene_source=HGNC:51819 | ||
|gene_symbol=TP53TG3HP | |gene_symbol=TP53TG3HP | ||
| Line 18: | Line 19: | ||
|hgnc_mgi_id=HGNC:51819 | |hgnc_mgi_id=HGNC:51819 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_034018 |
|nearest_refseq=NR_034018 | |nearest_refseq=NR_034018 | ||
|nearest_unigene=Hs.97712 | |nearest_unigene=Hs.97712 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=35506110 | |start=35506110 | ||
| + | |start_of_center_position=35506113 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000669868.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_157190.1 | |tss_id=hg_157190.1 | ||
Latest revision as of 14:14, 16 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 35506113 |
|---|---|
| End of the center position in the TSS region: | 35506114 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000669868.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENST00000669868.1:0 ENST00000667946.1:-101 ENST00000656785.1:-124 ENST00000562591.1:-345 BC038761:-345 ENST00000666603.1:-366 ENST00000664405.1:-370 ENST00000653340.1:-370 ENST00000658117.1:399 ENST00000662587.1:-450 |
TATA-Box annotation
| Distance to TSS: | 1056 |
|---|---|
| Nearest PromoterID: | NR_034018 |
| Entrez ID: | 100130700 |
| Nearest Unigene: | Hs.97712 |
| Nearest Refseq: | NR_034018 |
| Nearest Ensembl: | |
| Gene Name: | TP53TG3HP |
| Gene Alias: | - |
| Gene Description: | TP53 target 3 family member H, pseudogene |
| Gene Type: | pseudo |
| CpG%: | 0.045 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
