Difference between revisions of "TSS:Hg 159076.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|Fbx39= | |Fbx39= | ||
| − | |all_trans=ENST00000575022 | + | |all_trans=ENST00000575022.1:-16 AK308712:-16 ENST00000572251.1:-71 AK311148:-71 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance=-16 | |distance=-16 | ||
| − | |distance_to_tss= | + | |distance_to_tss=10680 |
|end=6786905 | |end=6786905 | ||
|end_of_center_position=6786896 | |end_of_center_position=6786896 | ||
|entrez_id=162517 | |entrez_id=162517 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| − | |gene_alias=CT144 | + | |gene_alias=CT144{{!}}Fbx39 |
|gene_description=F-box protein 39 | |gene_description=F-box protein 39 | ||
|gene_id=162517 | |gene_id=162517 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_153230 | |nearest_refseq=NM_153230 | ||
|nearest_unigene=Hs.368364 | |nearest_unigene=Hs.368364 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=6786885 | |start=6786885 | ||
|start_of_center_position=6786895 | |start_of_center_position=6786895 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000575022 | + | |transcript_name=ENST00000575022.1 AK308712 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_159076.1 | |tss_id=hg_159076.1 | ||
Revision as of 14:57, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6786895 |
|---|---|
| End of the center position in the TSS region: | 6786896 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000575022.1 AK308712 |
|---|---|
| Distance: | -16 |
| Num_trans: | 4 |
| All_trans: | ENST00000575022.1:-16 AK308712:-16 ENST00000572251.1:-71 AK311148:-71 |
TATA-Box annotation
| Distance to TSS: | 10680 |
|---|---|
| Nearest PromoterID: | NM_153230 |
| Entrez ID: | 162517 |
| Nearest Unigene: | Hs.368364 |
| Nearest Refseq: | NM_153230 |
| Nearest Ensembl: | ENSG00000177294 |
| Gene Name: | F-box protein 39 |
| Gene Alias: | CT144|Fbx39 |
| Gene Description: | F-box protein 39 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
