Difference between revisions of "TSS:Hg 161568.1"
From referenceTSS
| Line 4: | Line 4: | ||
|DLX9= | |DLX9= | ||
|OFC15= | |OFC15= | ||
| − | |all_trans=AB527463:-49 BT006978:-49 KJ891055:-49 ENST00000505318.2 | + | |all_trans=AB527463:-49 BT006978:-49 KJ891055:-49 ENST00000505318.2:-188 AF254115:-318 BC016145:-320 ENST00000240306.5:-328 NM_138281:-328 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
|distance=-49 | |distance=-49 | ||
| − | |distance_to_tss= | + | |distance_to_tss=339 |
|end=49969541 | |end=49969541 | ||
|end_of_center_position=49969530 | |end_of_center_position=49969530 | ||
|entrez_id=1748 | |entrez_id=1748 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| − | |gene_alias=BP1 | + | |gene_alias=BP1{{!}}DLX7{{!}}DLX8{{!}}DLX9{{!}}OFC15 |
|gene_description=distal-less homeobox 4 | |gene_description=distal-less homeobox 4 | ||
|gene_id=1748 | |gene_id=1748 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_001934 | |nearest_refseq=NM_001934 | ||
|nearest_unigene=Hs.591167 | |nearest_unigene=Hs.591167 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=49969517 | |start=49969517 | ||
Revision as of 15:55, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 49969529 |
|---|---|
| End of the center position in the TSS region: | 49969530 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AB527463 BT006978 KJ891055 |
|---|---|
| Distance: | -49 |
| Num_trans: | 8 |
| All_trans: | AB527463:-49 BT006978:-49 KJ891055:-49 ENST00000505318.2:-188 AF254115:-318 BC016145:-320 ENST00000240306.5:-328 NM_138281:-328 |
TATA-Box annotation
| Distance to TSS: | 339 |
|---|---|
| Nearest PromoterID: | NM_138281 |
| Entrez ID: | 1748 |
| Nearest Unigene: | Hs.591167 |
| Nearest Refseq: | NM_001934 |
| Nearest Ensembl: | ENSG00000108813 |
| Gene Name: | distal-less homeobox 4 |
| Gene Alias: | BP1|DLX7|DLX8|DLX9|OFC15 |
| Gene Description: | distal-less homeobox 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
