Difference between revisions of "TSS:Hg 162330.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC069493:-20 HQ258641:20 KJ890809:20 KJ896532:20 BC113492:-32 BC113486:-32 AK313852:-34 | + | |all_trans=BC069493:-20 HQ258641:20 KJ890809:20 KJ896532:20 BC113492:-32 BC113486:-32 AK313852:-34 L07738:-43 ENST00000226021.5:-79 NM_000727:-79 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
|distance=-20 | |distance=-20 | ||
| − | |distance_to_tss= | + | |distance_to_tss=81 |
|end=67044637 | |end=67044637 | ||
|end_of_center_position=67044635 | |end_of_center_position=67044635 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_000727 | |nearest_refseq=NM_000727 | ||
|nearest_unigene=Hs.147989 | |nearest_unigene=Hs.147989 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=67044632 | |start=67044632 | ||
Revision as of 16:13, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 67044634 |
|---|---|
| End of the center position in the TSS region: | 67044635 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC069493 |
|---|---|
| Distance: | -20 |
| Num_trans: | 10 |
| All_trans: | BC069493:-20 HQ258641:20 KJ890809:20 KJ896532:20 BC113492:-32 BC113486:-32 AK313852:-34 L07738:-43 ENST00000226021.5:-79 NM_000727:-79 |
TATA-Box annotation
| Distance to TSS: | 81 |
|---|---|
| Nearest PromoterID: | NM_000727 |
| Entrez ID: | 786 |
| Nearest Unigene: | Hs.147989 |
| Nearest Refseq: | NM_000727 |
| Nearest Ensembl: | ENSG00000108878 |
| Gene Name: | calcium voltage-gated channel auxiliary subunit gamma 1 |
| Gene Alias: | CACNLG |
| Gene Description: | calcium voltage-gated channel auxiliary subunit gamma 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
