Difference between revisions of "TSS:Hg 162766.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000579469. | + | |all_trans=BC062771:148 ENST00000579469.2:-156 NM_001162997:-156 ENST00000556126.2:-164 AK131023:221 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=148 |
| − | |distance_to_tss= | + | |distance_to_tss=161 |
|end=75646418 | |end=75646418 | ||
|end_of_center_position=75646413 | |end_of_center_position=75646413 | ||
|entrez_id=100130933 | |entrez_id=100130933 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=C17orf110 | + | |gene_alias=C17orf110{{!}}ELN |
|gene_description=small integral membrane protein 6 | |gene_description=small integral membrane protein 6 | ||
|gene_id=100130933 | |gene_id=100130933 | ||
| Line 15: | Line 15: | ||
|gene_source=HGNC:40032 | |gene_source=HGNC:40032 | ||
|gene_symbol=SMIM6 | |gene_symbol=SMIM6 | ||
| − | |gene_synonyms= | + | |gene_synonyms=ELN |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:40032 | |hgnc_mgi_id=HGNC:40032 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001162997 | |nearest_refseq=NM_001162997 | ||
|nearest_unigene=Hs.662541 | |nearest_unigene=Hs.662541 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
|start=75646406 | |start=75646406 | ||
|start_of_center_position=75646412 | |start_of_center_position=75646412 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=BC062771 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_162766.1 | |tss_id=hg_162766.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 16:23, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 75646412 |
|---|---|
| End of the center position in the TSS region: | 75646413 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC062771 |
|---|---|
| Distance: | 148 |
| Num_trans: | 5 |
| All_trans: | BC062771:148 ENST00000579469.2:-156 NM_001162997:-156 ENST00000556126.2:-164 AK131023:221 |
TATA-Box annotation
| Distance to TSS: | 161 |
|---|---|
| Nearest PromoterID: | NM_001162997 |
| Entrez ID: | 100130933 |
| Nearest Unigene: | Hs.662541 |
| Nearest Refseq: | NM_001162997 |
| Nearest Ensembl: | ENSG00000259120 |
| Gene Name: | small integral membrane protein 6 |
| Gene Alias: | C17orf110|ELN |
| Gene Description: | small integral membrane protein 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
