Difference between revisions of "TSS:Hg 167047.1"
From referenceTSS
| Line 2: | Line 2: | ||
|CARPX= | |CARPX= | ||
|HUCEP-15= | |HUCEP-15= | ||
| − | |all_trans=AY358509:21 ENST00000571371.5:24 ENST00000573294 | + | |all_trans=AY358509:21 ENST00000571371.5:24 ENST00000573294.1:24 CR749607:24 AK294652:-226 AK313001:-244 AL161812:299 JF432658:300 KJ894363:300 AB001597:301 AB529209:301 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
|distance=21 | |distance=21 | ||
| − | |distance_to_tss= | + | |distance_to_tss=619 |
|end=52158103 | |end=52158103 | ||
|end_of_center_position=52158095 | |end_of_center_position=52158095 | ||
|entrez_id=56934 | |entrez_id=56934 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias=CA-RPX | + | |gene_alias=CA-RPX{{!}}CARPX{{!}}HUCEP-15 |
|gene_description=carbonic anhydrase 10 | |gene_description=carbonic anhydrase 10 | ||
|gene_id=56934 | |gene_id=56934 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_020178 | |nearest_refseq=NM_020178 | ||
|nearest_unigene=Hs.463466 | |nearest_unigene=Hs.463466 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=52158086 | |start=52158086 | ||
Revision as of 18:01, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 52158094 |
|---|---|
| End of the center position in the TSS region: | 52158095 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AY358509 |
|---|---|
| Distance: | 21 |
| Num_trans: | 11 |
| All_trans: | AY358509:21 ENST00000571371.5:24 ENST00000573294.1:24 CR749607:24 AK294652:-226 AK313001:-244 AL161812:299 JF432658:300 KJ894363:300 AB001597:301 AB529209:301 |
TATA-Box annotation
| Distance to TSS: | 619 |
|---|---|
| Nearest PromoterID: | NM_020178 |
| Entrez ID: | 56934 |
| Nearest Unigene: | Hs.463466 |
| Nearest Refseq: | NM_020178 |
| Nearest Ensembl: | ENSG00000154975 |
| Gene Name: | carbonic anhydrase 10 |
| Gene Alias: | CA-RPX|CARPX|HUCEP-15 |
| Gene Description: | carbonic anhydrase 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
