Difference between revisions of "TSS:Hg 167052.1"
From referenceTSS
| Line 2: | Line 2: | ||
|CARPX= | |CARPX= | ||
|HUCEP-15= | |HUCEP-15= | ||
| − | |all_trans= | + | |all_trans=BC068462:12 CR936674:-17 ENST00000451037.7:25 NM_020178:25 BC047456:54 LF212426:-328 MA448003:-328 AK313001:392 AK294652:410 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
|distance=12 | |distance=12 | ||
| − | |distance_to_tss=29 | + | |distance_to_tss=-29 |
|end=52158748 | |end=52158748 | ||
|end_of_center_position=52158744 | |end_of_center_position=52158744 | ||
|entrez_id=56934 | |entrez_id=56934 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=CA-RPX | + | |gene_alias=CA-RPX{{!}}CARPX{{!}}HUCEP-15 |
|gene_description=carbonic anhydrase 10 | |gene_description=carbonic anhydrase 10 | ||
|gene_id=56934 | |gene_id=56934 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_020178 | |nearest_refseq=NM_020178 | ||
|nearest_unigene=Hs.463466 | |nearest_unigene=Hs.463466 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=52158738 | |start=52158738 | ||
|start_of_center_position=52158743 | |start_of_center_position=52158743 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC068462 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_167052.1 | |tss_id=hg_167052.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 18:01, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 52158743 |
|---|---|
| End of the center position in the TSS region: | 52158744 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC068462 |
|---|---|
| Distance: | 12 |
| Num_trans: | 9 |
| All_trans: | BC068462:12 CR936674:-17 ENST00000451037.7:25 NM_020178:25 BC047456:54 LF212426:-328 MA448003:-328 AK313001:392 AK294652:410 |
TATA-Box annotation
| Distance to TSS: | -29 |
|---|---|
| Nearest PromoterID: | NM_020178 |
| Entrez ID: | 56934 |
| Nearest Unigene: | Hs.463466 |
| Nearest Refseq: | NM_020178 |
| Nearest Ensembl: | ENSG00000154975 |
| Gene Name: | carbonic anhydrase 10 |
| Gene Alias: | CA-RPX|CARPX|HUCEP-15 |
| Gene Description: | carbonic anhydrase 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
