Difference between revisions of "TSS:Hg 168699.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000572301.1:1 uc060lja.1:1 ENST00000574041.5:-17 uc060liz.1:-17 ENST00000570301.5:93 uc060lix.1:93 ENST00000572077.5:-131 NM_001272086:-131 uc060l...") |
|||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000572301.1:1 | + | |all_trans=ENST00000572301.1:1 ENST00000574041.5:-17 ENST00000612902.5:46 NR_164138:97 ENST00000570301.6:-131 NR_164137:-153 ENST00000572077.6:-178 ENST00000664998.1:-178 ENST00000664400.1:-208 ENST00000669395.1:-216 ENST00000648736.1:-235 ENST00000659293.1:-235 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-100 | |distance_to_tss=-100 | ||
|end=81385229 | |end=81385229 | ||
| + | |end_of_center_position=81385226 | ||
|entrez_id=100130370 | |entrez_id=100130370 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
| Line 11: | Line 12: | ||
|gene_description=uncharacterized LOC100130370 | |gene_description=uncharacterized LOC100130370 | ||
|gene_id=100130370 | |gene_id=100130370 | ||
| − | |gene_name= | + | |gene_name=LOC100130370 |
|gene_source=EntrezGene:100130370 | |gene_source=EntrezGene:100130370 | ||
|gene_symbol=LOC100130370 | |gene_symbol=LOC100130370 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001272086 | |nearest_refseq=NM_001272086 | ||
|nearest_unigene=Hs.646594 | |nearest_unigene=Hs.646594 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=81385221 | |start=81385221 | ||
| + | |start_of_center_position=81385225 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000572301 | + | |transcript_name=ENST00000572301.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_168699.1 | |tss_id=hg_168699.1 | ||
Latest revision as of 18:39, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 81385225 |
|---|---|
| End of the center position in the TSS region: | 81385226 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000572301.1 |
|---|---|
| Distance: | 1 |
| Num_trans: | 12 |
| All_trans: | ENST00000572301.1:1 ENST00000574041.5:-17 ENST00000612902.5:46 NR_164138:97 ENST00000570301.6:-131 NR_164137:-153 ENST00000572077.6:-178 ENST00000664998.1:-178 ENST00000664400.1:-208 ENST00000669395.1:-216 ENST00000648736.1:-235 ENST00000659293.1:-235 |
TATA-Box annotation
| Distance to TSS: | -100 |
|---|---|
| Nearest PromoterID: | NM_001347841 |
| Entrez ID: | 100130370 |
| Nearest Unigene: | Hs.646594 |
| Nearest Refseq: | NM_001272086 |
| Nearest Ensembl: | |
| Gene Name: | LOC100130370 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100130370 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
