Difference between revisions of "TSS:Hg 169189.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|TGIF= | |TGIF= | ||
| − | |all_trans=BC000814:63 ENST00000577543.5 | + | |all_trans=BC000814:63 ENST00000577543.5:-125 AF179900:141 X89750:-146 CR450333:147 KJ892273:147 KR709512:147 KR709513:147 KR709514:147 KR709515:147 KR712201:147 KR712206:147 CU674410:147 ENST00000551402.1:-160 AK309471:-160 ENST00000343820.10:-165 NM_003244:-165 ENST00000546979.5:-301 ENST00000407501.6:-455 |
|chr=chr18 | |chr=chr18 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| Line 10: | Line 10: | ||
|entrez_id=7050 | |entrez_id=7050 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=HPE4 | + | |gene_alias=HPE4{{!}}TGIF |
|gene_description=TGFB induced factor homeobox 1 | |gene_description=TGFB induced factor homeobox 1 | ||
|gene_id=7050 | |gene_id=7050 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_003244 | |nearest_refseq=NM_003244 | ||
|nearest_unigene=Hs.373550 | |nearest_unigene=Hs.373550 | ||
| − | |num_trans= | + | |num_trans=19 |
|species=human | |species=human | ||
|start=3450336 | |start=3450336 | ||
Revision as of 18:50, 16 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 3450339 |
|---|---|
| End of the center position in the TSS region: | 3450340 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC000814 |
|---|---|
| Distance: | 63 |
| Num_trans: | 19 |
| All_trans: | BC000814:63 ENST00000577543.5:-125 AF179900:141 X89750:-146 CR450333:147 KJ892273:147 KR709512:147 KR709513:147 KR709514:147 KR709515:147 KR712201:147 KR712206:147 CU674410:147 ENST00000551402.1:-160 AK309471:-160 ENST00000343820.10:-165 NM_003244:-165 ENST00000546979.5:-301 ENST00000407501.6:-455 |
TATA-Box annotation
| Distance to TSS: | 168 |
|---|---|
| Nearest PromoterID: | NM_003244 |
| Entrez ID: | 7050 |
| Nearest Unigene: | Hs.373550 |
| Nearest Refseq: | NM_003244 |
| Nearest Ensembl: | ENSG00000177426 |
| Gene Name: | TGFB induced factor homeobox 1 |
| Gene Alias: | HPE4|TGIF |
| Gene Description: | TGFB induced factor homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
