Difference between revisions of "TSS:Hg 169191.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|TGIF= | |TGIF= | ||
| − | |all_trans=ENST00000551541.5:0 | + | |all_trans=ENST00000551541.5:0 NM_001374397:0 NM_170695:0 NM_173210:0 AK307230:61 ENST00000345133.9:62 ENST00000330513.10:69 BC031268:69 ENST00000549546.5:116 CU689140:372 AB527497:372 DQ894751:372 DQ891563:372 KJ897666:372 |
|chr=chr18 | |chr=chr18 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=4 |
|end=3451608 | |end=3451608 | ||
|end_of_center_position=3451598 | |end_of_center_position=3451598 | ||
|entrez_id=7050 | |entrez_id=7050 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| − | |gene_alias=HPE4 | + | |gene_alias=HPE4{{!}}TGIF |
|gene_description=TGFB induced factor homeobox 1 | |gene_description=TGFB induced factor homeobox 1 | ||
|gene_id=7050 | |gene_id=7050 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_003244 | |nearest_refseq=NM_003244 | ||
|nearest_unigene=Hs.373550 | |nearest_unigene=Hs.373550 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=3451586 | |start=3451586 | ||
|start_of_center_position=3451597 | |start_of_center_position=3451597 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000551541.5 | + | |transcript_name=ENST00000551541.5 NM_001374397 NM_170695 NM_173210 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_169191.1 | |tss_id=hg_169191.1 | ||
Revision as of 18:50, 16 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 3451597 |
|---|---|
| End of the center position in the TSS region: | 3451598 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000551541.5 NM_001374397 NM_170695 NM_173210 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENST00000551541.5:0 NM_001374397:0 NM_170695:0 NM_173210:0 AK307230:61 ENST00000345133.9:62 ENST00000330513.10:69 BC031268:69 ENST00000549546.5:116 CU689140:372 AB527497:372 DQ894751:372 DQ891563:372 KJ897666:372 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_173210 |
| Entrez ID: | 7050 |
| Nearest Unigene: | Hs.373550 |
| Nearest Refseq: | NM_003244 |
| Nearest Ensembl: | ENSG00000177426 |
| Gene Name: | TGFB induced factor homeobox 1 |
| Gene Alias: | HPE4|TGIF |
| Gene Description: | TGFB induced factor homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
