Difference between revisions of "TSS:Hg 171646.1"
From referenceTSS
| Line 2: | Line 2: | ||
|ZNF397OS= | |ZNF397OS= | ||
|ZNF917= | |ZNF917= | ||
| − | |all_trans=ENST00000610712.1:0 ENST00000333206. | + | |all_trans=ENST00000610712.1:0 ENST00000333206.10:0 ENST00000420878.7:0 ENST00000589178.5:0 ENST00000592278.1:0 ENST00000592211.1:0 ENST00000586922.2:0 ENST00000588832.1:0 NM_001288711:0 NM_001166012:0 NM_001112734:0 AY234408:0 AK303447:0 AK131291:0 AK128697:0 |
|chr=chr18 | |chr=chr18 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=7 |
|end=35290259 | |end=35290259 | ||
|end_of_center_position=35290222 | |end_of_center_position=35290222 | ||
|entrez_id=100101467 | |entrez_id=100101467 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| − | |gene_alias=ZNF-WYM | + | |gene_alias=ZNF-WYM{{!}}ZNF397OS{{!}}ZNF917 |
|gene_description=zinc finger and SCAN domain containing 30 | |gene_description=zinc finger and SCAN domain containing 30 | ||
|gene_id=100101467 | |gene_id=100101467 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:33517 | |hgnc_mgi_id=HGNC:33517 | ||
|nearest_ensembl=ENSG00000186814 | |nearest_ensembl=ENSG00000186814 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001166012 |
|nearest_refseq=NM_001112734 | |nearest_refseq=NM_001112734 | ||
|nearest_unigene=Hs.619840 | |nearest_unigene=Hs.619840 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=human | |species=human | ||
|start=35290184 | |start=35290184 | ||
|start_of_center_position=35290221 | |start_of_center_position=35290221 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000610712.1 ENST00000333206. | + | |transcript_name=ENST00000610712.1 ENST00000333206.10 ENST00000420878.7 ENST00000589178.5 ENST00000592278.1 ENST00000592211.1 ENST00000586922.2 ENST00000588832.1 NM_001288711 NM_001166012 NM_001112734 AY234408 AK303447 AK131291 AK128697 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_171646.1 | |tss_id=hg_171646.1 | ||
Revision as of 19:47, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35290221 |
|---|---|
| End of the center position in the TSS region: | 35290222 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000610712.1 ENST00000333206.10 ENST00000420878.7 ENST00000589178.5 ENST00000592278.1 ENST00000592211.1 ENST00000586922.2 ENST00000588832.1 NM_001288711 NM_001166012 NM_001112734 AY234408 AK303447 AK131291 AK128697 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | ENST00000610712.1:0 ENST00000333206.10:0 ENST00000420878.7:0 ENST00000589178.5:0 ENST00000592278.1:0 ENST00000592211.1:0 ENST00000586922.2:0 ENST00000588832.1:0 NM_001288711:0 NM_001166012:0 NM_001112734:0 AY234408:0 AK303447:0 AK131291:0 AK128697:0 |
TATA-Box annotation
| Distance to TSS: | 7 |
|---|---|
| Nearest PromoterID: | NM_001166012 |
| Entrez ID: | 100101467 |
| Nearest Unigene: | Hs.619840 |
| Nearest Refseq: | NM_001112734 |
| Nearest Ensembl: | ENSG00000186814 |
| Gene Name: | zinc finger and SCAN domain containing 30 |
| Gene Alias: | ZNF-WYM|ZNF397OS|ZNF917 |
| Gene Description: | zinc finger and SCAN domain containing 30 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
