Difference between revisions of "TSS:Hg 173528.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK128820:-26 |chr=chr19 |cpg_percent=0.02 |distance=-26 |distance_to_tss=-5116 |end=7011534 |entrez_id=497049 |gc_percent=0.547264 |gene_alias=- |gene_d...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK128820:-26 | + | |all_trans=AK128820:-26 ENST00000636139.1:350 |
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-5116 | |distance_to_tss=-5116 | ||
|end=7011534 | |end=7011534 | ||
| + | |end_of_center_position=7011532 | ||
|entrez_id=497049 | |entrez_id=497049 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
| Line 11: | Line 12: | ||
|gene_description=microtubule affinity regulating kinase 1 pseudogene | |gene_description=microtubule affinity regulating kinase 1 pseudogene | ||
|gene_id=100034248 | |gene_id=100034248 | ||
| − | |gene_name= | + | |gene_name=FLJ25758 |
|gene_source=EntrezGene:100034248 | |gene_source=EntrezGene:100034248 | ||
|gene_symbol=LOC100034248 | |gene_symbol=LOC100034248 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_001011541 | |nearest_refseq=NM_001011541 | ||
|nearest_unigene=Hs.367930 | |nearest_unigene=Hs.367930 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=7011528 | |start=7011528 | ||
| + | |start_of_center_position=7011531 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK128820 | |transcript_name=AK128820 | ||
Latest revision as of 20:30, 16 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 7011531 |
|---|---|
| End of the center position in the TSS region: | 7011532 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK128820 |
|---|---|
| Distance: | -26 |
| Num_trans: | 2 |
| All_trans: | AK128820:-26 ENST00000636139.1:350 |
TATA-Box annotation
| Distance to TSS: | -5116 |
|---|---|
| Nearest PromoterID: | NR_024372 |
| Entrez ID: | 497049 |
| Nearest Unigene: | Hs.367930 |
| Nearest Refseq: | NM_001011541 |
| Nearest Ensembl: | |
| Gene Name: | FLJ25758 |
| Gene Alias: | - |
| Gene Description: | microtubule affinity regulating kinase 1 pseudogene |
| Gene Type: | pseudo |
| CpG%: | 0.02 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
