Difference between revisions of "TSS:Hg 180645.1"
From referenceTSS
| Line 2: | Line 2: | ||
|CLIPR59= | |CLIPR59= | ||
|RSNL1= | |RSNL1= | ||
| − | |all_trans=KJ893505:14 CU680510:14 AK289509:-256 AK090732:-273 ENST00000593074.5:-288 | + | |all_trans=KJ893505:14 CU680510:14 LF367338:84 MA602915:84 NM_001199570:-252 AK289509:-256 AK090732:-273 ENST00000593074.5:-288 AK294748:-385 BC013116:-424 LF207597:-456 MA443174:-456 ENST00000592017.5:-488 ENST00000360535.9:-490 NM_015526:-490 AJ427922:-490 AK092354:-491 |
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance=14 | |distance=14 | ||
| − | |distance_to_tss= | + | |distance_to_tss=258 |
|end=36032383 | |end=36032383 | ||
|end_of_center_position=36032378 | |end_of_center_position=36032378 | ||
|entrez_id=25999 | |entrez_id=25999 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=CLIPR-59 | + | |gene_alias=CLIPR-59{{!}}CLIPR59{{!}}RSNL1 |
|gene_description=CAP-Gly domain containing linker protein 3 | |gene_description=CAP-Gly domain containing linker protein 3 | ||
|gene_id=25999 | |gene_id=25999 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_015526 | |nearest_refseq=NM_015526 | ||
|nearest_unigene=Hs.466539 | |nearest_unigene=Hs.466539 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=human | |species=human | ||
|start=36032371 | |start=36032371 | ||
Revision as of 23:13, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 36032377 |
|---|---|
| End of the center position in the TSS region: | 36032378 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | KJ893505 CU680510 |
|---|---|
| Distance: | 14 |
| Num_trans: | 17 |
| All_trans: | KJ893505:14 CU680510:14 LF367338:84 MA602915:84 NM_001199570:-252 AK289509:-256 AK090732:-273 ENST00000593074.5:-288 AK294748:-385 BC013116:-424 LF207597:-456 MA443174:-456 ENST00000592017.5:-488 ENST00000360535.9:-490 NM_015526:-490 AJ427922:-490 AK092354:-491 |
TATA-Box annotation
| Distance to TSS: | 258 |
|---|---|
| Nearest PromoterID: | NM_001199570 |
| Entrez ID: | 25999 |
| Nearest Unigene: | Hs.466539 |
| Nearest Refseq: | NM_015526 |
| Nearest Ensembl: | ENSG00000105270 |
| Gene Name: | CAP-Gly domain containing linker protein 3 |
| Gene Alias: | CLIPR-59|CLIPR59|RSNL1 |
| Gene Description: | CAP-Gly domain containing linker protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
