Difference between revisions of "TSS:Hg 181555.1"
From referenceTSS
| Line 6: | Line 6: | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=-54 | |distance=-54 | ||
| − | |distance_to_tss= | + | |distance_to_tss=3451 |
|end=45688512 | |end=45688512 | ||
|end_of_center_position=45688502 | |end_of_center_position=45688502 | ||
|entrez_id=6633 | |entrez_id=6633 | ||
|gc_percent=0.517413 | |gc_percent=0.517413 | ||
| − | |gene_alias=SMD2 | + | |gene_alias=SMD2{{!}}SNRPD1{{!}}Sm-D2 |
|gene_description=small nuclear ribonucleoprotein D2 polypeptide | |gene_description=small nuclear ribonucleoprotein D2 polypeptide | ||
|gene_id=6633 | |gene_id=6633 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:11159 | |hgnc_mgi_id=HGNC:11159 | ||
|nearest_ensembl=ENSG00000125743 | |nearest_ensembl=ENSG00000125743 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001369752 |
|nearest_refseq=NM_004597 | |nearest_refseq=NM_004597 | ||
|nearest_unigene=Hs.515472 | |nearest_unigene=Hs.515472 | ||
Revision as of 23:34, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 45688501 |
|---|---|
| End of the center position in the TSS region: | 45688502 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC001930 DQ891246 DQ894432 AB464218 |
|---|---|
| Distance: | -54 |
| Num_trans: | 5 |
| All_trans: | BC001930:-54 DQ891246:-54 DQ894432:-54 AB464218:-54 KJ892177:-58 |
TATA-Box annotation
| Distance to TSS: | 3451 |
|---|---|
| Nearest PromoterID: | NM_001369752 |
| Entrez ID: | 6633 |
| Nearest Unigene: | Hs.515472 |
| Nearest Refseq: | NM_004597 |
| Nearest Ensembl: | ENSG00000125743 |
| Gene Name: | small nuclear ribonucleoprotein D2 polypeptide |
| Gene Alias: | SMD2|SNRPD1|Sm-D2 |
| Gene Description: | small nuclear ribonucleoprotein D2 polypeptide |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
