Difference between revisions of "TSS:Hg 186557.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000319682.2:15 NR_024564 | + | |all_trans=ENST00000319682.2:15 NR_024564:15 AK097497:15 |
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 12: | Line 12: | ||
|gene_description=uncharacterized LOC100130264 | |gene_description=uncharacterized LOC100130264 | ||
|gene_id=100130264 | |gene_id=100130264 | ||
| − | |gene_name= | + | |gene_name=SLC24A3 antisense RNA 1 |
| − | |gene_source= | + | |gene_source=HGNC:40540 |
| − | |gene_symbol= | + | |gene_symbol=SLC24A3-AS1 |
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |hgnc_mgi_id= | + | |hgnc_mgi_id=HGNC:40540 |
|nearest_ensembl=ENSG00000179447 | |nearest_ensembl=ENSG00000179447 | ||
|nearest_promoter_id=NR_024564 | |nearest_promoter_id=NR_024564 | ||
|nearest_refseq=NR_024564 | |nearest_refseq=NR_024564 | ||
|nearest_unigene=Hs.683814 | |nearest_unigene=Hs.683814 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=19284610 | |start=19284610 | ||
|start_of_center_position=19284613 | |start_of_center_position=19284613 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000319682.2 NR_024564 | + | |transcript_name=ENST00000319682.2 NR_024564 AK097497 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_186557.1 | |tss_id=hg_186557.1 | ||
Revision as of 01:30, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 19284613 |
|---|---|
| End of the center position in the TSS region: | 19284614 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000319682.2 NR_024564 AK097497 |
|---|---|
| Distance: | 15 |
| Num_trans: | 3 |
| All_trans: | ENST00000319682.2:15 NR_024564:15 AK097497:15 |
TATA-Box annotation
| Distance to TSS: | -18 |
|---|---|
| Nearest PromoterID: | NR_024564 |
| Entrez ID: | 100130264 |
| Nearest Unigene: | Hs.683814 |
| Nearest Refseq: | NR_024564 |
| Nearest Ensembl: | ENSG00000179447 |
| Gene Name: | SLC24A3 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100130264 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.517413 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
