Difference between revisions of "TSS:Hg 199956.1"
From referenceTSS
| Line 6: | Line 6: | ||
|PSCTK1= | |PSCTK1= | ||
|XLA= | |XLA= | ||
| − | |all_trans=ENST00000308731. | + | |all_trans=ENST00000308731.8:0 NM_000061:0 AK057105:0 AK314382:0 AK225577:0 X58957:7 BC109079:12 BC109080:12 ENST00000464567.1:20 ENST00000372880.5:-24 NM_001287345:-24 |
|chr=chrX | |chr=chrX | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 15: | Line 15: | ||
|entrez_id=695 | |entrez_id=695 | ||
|gc_percent=0.492537 | |gc_percent=0.492537 | ||
| − | |gene_alias=AGMX1 | + | |gene_alias=AGMX1{{!}}AT{{!}}ATK{{!}}BPK{{!}}IGHD3{{!}}IMD1{{!}}PSCTK1{{!}}XLA |
|gene_description=Bruton tyrosine kinase | |gene_description=Bruton tyrosine kinase | ||
|gene_id=695 | |gene_id=695 | ||
| Line 25: | Line 25: | ||
|hgnc_mgi_id=HGNC:1133 | |hgnc_mgi_id=HGNC:1133 | ||
|nearest_ensembl=ENSG00000010671 | |nearest_ensembl=ENSG00000010671 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_000061 |
|nearest_refseq=NM_000061 | |nearest_refseq=NM_000061 | ||
|nearest_unigene=Hs.159494 | |nearest_unigene=Hs.159494 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=101386167 | |start=101386167 | ||
|start_of_center_position=101386183 | |start_of_center_position=101386183 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000308731. | + | |transcript_name=ENST00000308731.8 NM_000061 AK057105 AK314382 AK225577 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_199956.1 | |tss_id=hg_199956.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q06187 | + | |uniprot_id=Q06187 Q5JY90 |
}} | }} | ||
Revision as of 06:37, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 101386183 |
|---|---|
| End of the center position in the TSS region: | 101386184 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000308731.8 NM_000061 AK057105 AK314382 AK225577 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENST00000308731.8:0 NM_000061:0 AK057105:0 AK314382:0 AK225577:0 X58957:7 BC109079:12 BC109080:12 ENST00000464567.1:20 ENST00000372880.5:-24 NM_001287345:-24 |
TATA-Box annotation
| Distance to TSS: | 40 |
|---|---|
| Nearest PromoterID: | NM_000061 |
| Entrez ID: | 695 |
| Nearest Unigene: | Hs.159494 |
| Nearest Refseq: | NM_000061 |
| Nearest Ensembl: | ENSG00000010671 |
| Gene Name: | Bruton tyrosine kinase |
| Gene Alias: | AGMX1|AT|ATK|BPK|IGHD3|IMD1|PSCTK1|XLA |
| Gene Description: | Bruton tyrosine kinase |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.492537 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
