Difference between revisions of "TSS:Hg 219689.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC013104:-4 BC000077:-7 ENST00000532702 | + | |all_trans=BC013104:-4 BC000077:-7 ENST00000532702.1:-10 ENST00000394920.6:-15 ENST00000529163.5:-16 ENST00000528957.6:-16 NM_001317782:-16 NM_000973:-16 NM_001317771:-16 NM_033301:-16 AK301073:-16 D28421:-16 AK289459:-22 BC012197:30 ENST00000531767.1:-46 BC093064:-46 ENST00000525232.5:-47 AK309619:-47 ENST00000527914.5:-49 ENST00000262584.7:-213 ENST00000533397.5:221 ENST00000529920.5:231 BC007935:231 BC030151:231 AB590228:240 DQ893309:243 EU176553:243 CU674022:244 BT007379:245 CR457046:245 ENST00000528296.5:249 ENST00000531975.5:317 LP997127:383 LY480927:383 LY495824:383 LY496511:383 LY497149:383 LY499157:383 LY500367:383 LZ238771:383 MP073629:383 MP080402:383 MS868989:383 MS880472:383 MS884336:383 MS885486:383 MS994519:383 MA822648:383 LY616535:383 MB473037:383 LP951752:383 LQ724883:383 LY480804:383 LY495674:383 LY496301:383 LY496956:383 LY498887:383 LY500359:383 LZ238512:383 MS868839:383 MS880202:383 MS884143:383 MS885478:383 MS994309:383 MA822312:383 LY616276:383 MB472806:383 ENST00000526668.5:415 BC000047:458 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
|distance=-4 | |distance=-4 | ||
| − | |distance_to_tss= | + | |distance_to_tss=16 |
|end=144792374 | |end=144792374 | ||
|end_of_center_position=144792374 | |end_of_center_position=144792374 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:10368 | |hgnc_mgi_id=HGNC:10368 | ||
|nearest_ensembl=ENSG00000161016 | |nearest_ensembl=ENSG00000161016 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_000973 |
|nearest_refseq=NM_000973 | |nearest_refseq=NM_000973 | ||
|nearest_unigene=Hs.178551 | |nearest_unigene=Hs.178551 | ||
| − | |num_trans= | + | |num_trans=69 |
|species=human | |species=human | ||
|start=144792373 | |start=144792373 | ||
Revision as of 08:16, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 144792373 |
|---|---|
| End of the center position in the TSS region: | 144792374 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC013104 |
|---|---|
| Distance: | -4 |
| Num_trans: | 69 |
| All_trans: | BC013104:-4 BC000077:-7 ENST00000532702.1:-10 ENST00000394920.6:-15 ENST00000529163.5:-16 ENST00000528957.6:-16 NM_001317782:-16 NM_000973:-16 NM_001317771:-16 NM_033301:-16 AK301073:-16 D28421:-16 AK289459:-22 BC012197:30 ENST00000531767.1:-46 BC093064:-46 ENST00000525232.5:-47 AK309619:-47 ENST00000527914.5:-49 ENST00000262584.7:-213 ENST00000533397.5:221 ENST00000529920.5:231 BC007935:231 BC030151:231 AB590228:240 DQ893309:243 EU176553:243 CU674022:244 BT007379:245 CR457046:245 ENST00000528296.5:249 ENST00000531975.5:317 LP997127:383 LY480927:383 LY495824:383 LY496511:383 LY497149:383 LY499157:383 LY500367:383 LZ238771:383 MP073629:383 MP080402:383 MS868989:383 MS880472:383 MS884336:383 MS885486:383 MS994519:383 MA822648:383 LY616535:383 MB473037:383 LP951752:383 LQ724883:383 LY480804:383 LY495674:383 LY496301:383 LY496956:383 LY498887:383 LY500359:383 LZ238512:383 MS868839:383 MS880202:383 MS884143:383 MS885478:383 MS994309:383 MA822312:383 LY616276:383 MB472806:383 ENST00000526668.5:415 BC000047:458 |
TATA-Box annotation
| Distance to TSS: | 16 |
|---|---|
| Nearest PromoterID: | NM_000973 |
| Entrez ID: | 6132 |
| Nearest Unigene: | Hs.178551 |
| Nearest Refseq: | NM_000973 |
| Nearest Ensembl: | ENSG00000161016 |
| Gene Name: | ribosomal protein L8 |
| Gene Alias: | L8 |
| Gene Description: | ribosomal protein L8 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
