Difference between revisions of "TSS:Hg 219717.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|FAM29A= | |FAM29A= | ||
| − | |all_trans=ENST00000380496.5 | + | |all_trans=ENST00000380496.5:-44 AK022964:-44 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=-44 | |distance=-44 | ||
| − | |distance_to_tss= | + | |distance_to_tss=9735 |
|end=19093169 | |end=19093169 | ||
|end_of_center_position=19093169 | |end_of_center_position=19093169 | ||
|entrez_id=54801 | |entrez_id=54801 | ||
|gc_percent=0.253731 | |gc_percent=0.253731 | ||
| − | |gene_alias=Dgt6 | + | |gene_alias=Dgt6{{!}}FAM29A |
|gene_description=HAUS augmin like complex subunit 6 | |gene_description=HAUS augmin like complex subunit 6 | ||
|gene_id=54801 | |gene_id=54801 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:25948 | |hgnc_mgi_id=HGNC:25948 | ||
|nearest_ensembl=ENSG00000147874 | |nearest_ensembl=ENSG00000147874 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001270890 |
|nearest_refseq=NM_017645 | |nearest_refseq=NM_017645 | ||
|nearest_unigene=Hs.533468 | |nearest_unigene=Hs.533468 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=19093168 | |start=19093168 | ||
|start_of_center_position=19093168 | |start_of_center_position=19093168 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000380496.5 | + | |transcript_name=ENST00000380496.5 AK022964 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_219717.1 | |tss_id=hg_219717.1 | ||
Revision as of 08:16, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 19093168 |
|---|---|
| End of the center position in the TSS region: | 19093169 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000380496.5 AK022964 |
|---|---|
| Distance: | -44 |
| Num_trans: | 2 |
| All_trans: | ENST00000380496.5:-44 AK022964:-44 |
TATA-Box annotation
| Distance to TSS: | 9735 |
|---|---|
| Nearest PromoterID: | NM_001270890 |
| Entrez ID: | 54801 |
| Nearest Unigene: | Hs.533468 |
| Nearest Refseq: | NM_017645 |
| Nearest Ensembl: | ENSG00000147874 |
| Gene Name: | HAUS augmin like complex subunit 6 |
| Gene Alias: | Dgt6|FAM29A |
| Gene Description: | HAUS augmin like complex subunit 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.253731 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
