Difference between revisions of "TSS:Hg 219791.1"
From referenceTSS
| Line 3: | Line 3: | ||
|GAQ= | |GAQ= | ||
|SWS= | |SWS= | ||
| − | |all_trans=BC069520:37 BC057777:63 BC067850:63 U40038:64 BC075096:86 BC075097:87 AF011496:104 AF329284:104 AF493896:104 JN184778:104 AM392842:104 AM393393:104 AM393764:104 AB463062:104 L76256:104 CU691228:104 | + | |all_trans=BC069520:37 BC057777:63 BC067850:63 GQ891431:63 U40038:64 BC075096:86 BC075097:87 AF011496:104 AF329284:104 AF493896:104 JN184778:104 AM392842:104 AM393393:104 AM393764:104 AB463062:104 L76256:104 CU691228:104 U43083:-116 ENST00000286548.9:-472 NM_002072:-472 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
|distance=37 | |distance=37 | ||
| − | |distance_to_tss= | + | |distance_to_tss=472 |
|end=78031339 | |end=78031339 | ||
|end_of_center_position=78031339 | |end_of_center_position=78031339 | ||
|entrez_id=2776 | |entrez_id=2776 | ||
|gc_percent=0.820896 | |gc_percent=0.820896 | ||
| − | |gene_alias=CMC1 | + | |gene_alias=CMC1{{!}}G-ALPHA-q{{!}}GAQ{{!}}SWS |
|gene_description=G protein subunit alpha q | |gene_description=G protein subunit alpha q | ||
|gene_id=2776 | |gene_id=2776 | ||
Revision as of 08:17, 17 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 78031338 |
|---|---|
| End of the center position in the TSS region: | 78031339 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC069520 |
|---|---|
| Distance: | 37 |
| Num_trans: | 20 |
| All_trans: | BC069520:37 BC057777:63 BC067850:63 GQ891431:63 U40038:64 BC075096:86 BC075097:87 AF011496:104 AF329284:104 AF493896:104 JN184778:104 AM392842:104 AM393393:104 AM393764:104 AB463062:104 L76256:104 CU691228:104 U43083:-116 ENST00000286548.9:-472 NM_002072:-472 |
TATA-Box annotation
| Distance to TSS: | 472 |
|---|---|
| Nearest PromoterID: | NM_002072 |
| Entrez ID: | 2776 |
| Nearest Unigene: | Hs.269782 |
| Nearest Refseq: | NM_002072 |
| Nearest Ensembl: | ENSG00000156052 |
| Gene Name: | G protein subunit alpha q |
| Gene Alias: | CMC1|G-ALPHA-q|GAQ|SWS |
| Gene Description: | G protein subunit alpha q |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.820896 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
