Difference between revisions of "TSS:Hg 219858.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|C9orf158= | |C9orf158= | ||
| − | |all_trans= | + | |all_trans=BC031878:6 ENST00000238379.9:-108 AK097067:-108 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| Line 10: | Line 10: | ||
|entrez_id=81932 | |entrez_id=81932 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
| − | |gene_alias=2810435D12Rik | + | |gene_alias=2810435D12Rik{{!}}C9orf158 |
|gene_description=haloacid dehalogenase like hydrolase domain containing 3 | |gene_description=haloacid dehalogenase like hydrolase domain containing 3 | ||
|gene_id=81932 | |gene_id=81932 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_031219 | |nearest_refseq=NM_031219 | ||
|nearest_unigene=Hs.7739 | |nearest_unigene=Hs.7739 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=113376066 | |start=113376066 | ||
|start_of_center_position=113376066 | |start_of_center_position=113376066 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC031878 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_219858.1 | |tss_id=hg_219858.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 08:18, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 113376066 |
|---|---|
| End of the center position in the TSS region: | 113376067 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC031878 |
|---|---|
| Distance: | 6 |
| Num_trans: | 3 |
| All_trans: | BC031878:6 ENST00000238379.9:-108 AK097067:-108 |
TATA-Box annotation
| Distance to TSS: | -6 |
|---|---|
| Nearest PromoterID: | NM_031219 |
| Entrez ID: | 81932 |
| Nearest Unigene: | Hs.7739 |
| Nearest Refseq: | NM_031219 |
| Nearest Ensembl: | ENSG00000119431 |
| Gene Name: | haloacid dehalogenase like hydrolase domain containing 3 |
| Gene Alias: | 2810435D12Rik|C9orf158 |
| Gene Description: | haloacid dehalogenase like hydrolase domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
