Difference between revisions of "TSS:Hg 220019.1"
From referenceTSS
| Line 4: | Line 4: | ||
|MAST-L= | |MAST-L= | ||
|THC2= | |THC2= | ||
| − | |all_trans=ENST00000375946.8:-141 | + | |all_trans=ENST00000375946.8:-141 LF383678:-141 MA619255:-141 AK074804:370 ENST00000375940.9:387 NM_001320756:387 NM_001372030:387 NM_001372029:387 NM_001320757:387 NM_001172304:387 NR_135469:387 NM_032844:387 NM_001172303:387 AK027719:398 ENST00000342386.10:405 BC009107:405 AK225319:429 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| Line 13: | Line 13: | ||
|entrez_id=84930 | |entrez_id=84930 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
| − | |gene_alias=GREATWALL | + | |gene_alias=GREATWALL{{!}}GW{{!}}GWL{{!}}MAST-L{{!}}THC2 |
|gene_description=microtubule associated serine/threonine kinase like | |gene_description=microtubule associated serine/threonine kinase like | ||
|gene_id=84930 | |gene_id=84930 | ||
| Line 23: | Line 23: | ||
|hgnc_mgi_id=HGNC:19042 | |hgnc_mgi_id=HGNC:19042 | ||
|nearest_ensembl=ENSG00000120539 | |nearest_ensembl=ENSG00000120539 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001172304 |
|nearest_refseq=NM_032844 | |nearest_refseq=NM_032844 | ||
|nearest_unigene=Hs.276905 | |nearest_unigene=Hs.276905 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=human | |species=human | ||
|start=27154964 | |start=27154964 | ||
|start_of_center_position=27154964 | |start_of_center_position=27154964 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000375946.8 | + | |transcript_name=ENST00000375946.8 LF383678 MA619255 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_220019.1 | |tss_id=hg_220019.1 | ||
Revision as of 08:20, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 27154964 |
|---|---|
| End of the center position in the TSS region: | 27154965 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000375946.8 LF383678 MA619255 |
|---|---|
| Distance: | -141 |
| Num_trans: | 17 |
| All_trans: | ENST00000375946.8:-141 LF383678:-141 MA619255:-141 AK074804:370 ENST00000375940.9:387 NM_001320756:387 NM_001372030:387 NM_001372029:387 NM_001320757:387 NM_001172304:387 NR_135469:387 NM_032844:387 NM_001172303:387 AK027719:398 ENST00000342386.10:405 BC009107:405 AK225319:429 |
TATA-Box annotation
| Distance to TSS: | 141 |
|---|---|
| Nearest PromoterID: | NM_001172304 |
| Entrez ID: | 84930 |
| Nearest Unigene: | Hs.276905 |
| Nearest Refseq: | NM_032844 |
| Nearest Ensembl: | ENSG00000120539 |
| Gene Name: | microtubule associated serine/threonine kinase like |
| Gene Alias: | GREATWALL|GW|GWL|MAST-L|THC2 |
| Gene Description: | microtubule associated serine/threonine kinase like |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
