Difference between revisions of "TSS:Hg 220102.1"
From referenceTSS
| Line 2: | Line 2: | ||
|CCDC109A= | |CCDC109A= | ||
|HsMCU= | |HsMCU= | ||
| − | |all_trans=ENST00000605597.5:79 ENST00000536019.5:79 NM_001270680 | + | |all_trans=ENST00000605597.5:79 ENST00000536019.5:79 NM_001270680:79 AK128016:79 BC010682:-366 JF432665:-388 AK301475:-390 AK315519:-392 ENST00000603649.5:-397 ENST00000604372.5:-397 ENST00000604679.5:-397 ENST00000357157.10:-397 AK311133:-397 AK310455:-397 AK075439:-397 ENST00000373053.7:-409 NM_001270679:-409 NR_073062:-409 NM_138357:-409 BC034235:-409 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| Line 11: | Line 11: | ||
|entrez_id=90550 | |entrez_id=90550 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| − | |gene_alias=C10orf42 | + | |gene_alias=C10orf42{{!}}CCDC109A{{!}}HsMCU |
|gene_description=mitochondrial calcium uniporter | |gene_description=mitochondrial calcium uniporter | ||
|gene_id=90550 | |gene_id=90550 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_138357 | |nearest_refseq=NM_138357 | ||
|nearest_unigene=Hs.591366 | |nearest_unigene=Hs.591366 | ||
| − | |num_trans= | + | |num_trans=20 |
|species=human | |species=human | ||
|start=72692539 | |start=72692539 | ||
|start_of_center_position=72692539 | |start_of_center_position=72692539 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000605597.5 ENST00000536019.5 NM_001270680 | + | |transcript_name=ENST00000605597.5 ENST00000536019.5 NM_001270680 AK128016 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_220102.1 | |tss_id=hg_220102.1 | ||
Revision as of 08:21, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 72692539 |
|---|---|
| End of the center position in the TSS region: | 72692540 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000605597.5 ENST00000536019.5 NM_001270680 AK128016 |
|---|---|
| Distance: | 79 |
| Num_trans: | 20 |
| All_trans: | ENST00000605597.5:79 ENST00000536019.5:79 NM_001270680:79 AK128016:79 BC010682:-366 JF432665:-388 AK301475:-390 AK315519:-392 ENST00000603649.5:-397 ENST00000604372.5:-397 ENST00000604679.5:-397 ENST00000357157.10:-397 AK311133:-397 AK310455:-397 AK075439:-397 ENST00000373053.7:-409 NM_001270679:-409 NR_073062:-409 NM_138357:-409 BC034235:-409 |
TATA-Box annotation
| Distance to TSS: | -79 |
|---|---|
| Nearest PromoterID: | NM_001270680 |
| Entrez ID: | 90550 |
| Nearest Unigene: | Hs.591366 |
| Nearest Refseq: | NM_138357 |
| Nearest Ensembl: | ENSG00000156026 |
| Gene Name: | mitochondrial calcium uniporter |
| Gene Alias: | C10orf42|CCDC109A|HsMCU |
| Gene Description: | mitochondrial calcium uniporter |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
