Difference between revisions of "TSS:Hg 221762.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000378644.5:-50 NM_001129979:-50 NM_001348924:-50 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| − | |distance=- | + | |distance=-50 |
| − | |distance_to_tss= | + | |distance_to_tss=50 |
|end=77199458 | |end=77199458 | ||
|end_of_center_position=77199458 | |end_of_center_position=77199458 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=77199457 | |start_of_center_position=77199457 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NM_001129979 | + | |transcript_name=ENST00000378644.5 NM_001129979 NM_001348924 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_221762.1 | |tss_id=hg_221762.1 | ||
Revision as of 08:39, 17 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 77199457 |
|---|---|
| End of the center position in the TSS region: | 77199458 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000378644.5 NM_001129979 NM_001348924 |
|---|---|
| Distance: | -50 |
| Num_trans: | 3 |
| All_trans: | ENST00000378644.5:-50 NM_001129979:-50 NM_001348924:-50 |
TATA-Box annotation
| Distance to TSS: | 50 |
|---|---|
| Nearest PromoterID: | NM_001129979 |
| Entrez ID: | 100130958 |
| Nearest Unigene: | Hs.734779 |
| Nearest Refseq: | NM_001129979 |
| Nearest Ensembl: | ENSG00000205078 |
| Gene Name: | synaptonemal complex central element protein 1 like |
| Gene Alias: | MRP2 |
| Gene Description: | synaptonemal complex central element protein 1 like |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
