Difference between revisions of "TSS:Hg 223479.1"
From referenceTSS
| Line 4: | Line 4: | ||
|NNE= | |NNE= | ||
|PPH= | |PPH= | ||
| − | |all_trans=EF036495:-13 | + | |all_trans=ENST00000645600.1:0 EF036495:-13 ENST00000464920.2:353 GU170215:353 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss=- | + | |distance_to_tss=-5355 |
|end=8871961 | |end=8871961 | ||
|end_of_center_position=8871945 | |end_of_center_position=8871945 | ||
| − | |entrez_id= | + | |entrez_id=102465436 |
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
| − | |gene_alias= | + | |gene_alias=hsa-mir-6728 |
| − | |gene_description= | + | |gene_description=microRNA 6728 |
|gene_id=2023 | |gene_id=2023 | ||
| − | |gene_name= | + | |gene_name=enolase 1 |
|gene_source=HGNC:3350 | |gene_source=HGNC:3350 | ||
|gene_symbol=ENO1 | |gene_symbol=ENO1 | ||
|gene_synonyms=MBP-1 PPH | |gene_synonyms=MBP-1 PPH | ||
| − | |gene_type= | + | |gene_type=ncRNA |
|hgnc_mgi_id=HGNC:3350 | |hgnc_mgi_id=HGNC:3350 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000274258 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_106786 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_106786 |
| − | |nearest_unigene= | + | |nearest_unigene= |
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=8871928 | |start=8871928 | ||
|start_of_center_position=8871944 | |start_of_center_position=8871944 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000645600.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_223479.1 | |tss_id=hg_223479.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 08:58, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 8871944 |
|---|---|
| End of the center position in the TSS region: | 8871945 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000645600.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | ENST00000645600.1:0 EF036495:-13 ENST00000464920.2:353 GU170215:353 |
TATA-Box annotation
| Distance to TSS: | -5355 |
|---|---|
| Nearest PromoterID: | NR_106786 |
| Entrez ID: | 102465436 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_106786 |
| Nearest Ensembl: | ENSG00000274258 |
| Gene Name: | enolase 1 |
| Gene Alias: | hsa-mir-6728 |
| Gene Description: | microRNA 6728 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
