Difference between revisions of "TSS:Hg 224103.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000492470 | + | |all_trans=ENST00000492470.1:39 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=39 | |distance=39 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-50991 |
|end=224565326 | |end=224565326 | ||
|end_of_center_position=224565326 | |end_of_center_position=224565326 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:26802 | |hgnc_mgi_id=HGNC:26802 | ||
|nearest_ensembl=ENSG00000143786 | |nearest_ensembl=ENSG00000143786 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_152495 |
|nearest_refseq=NM_152495 | |nearest_refseq=NM_152495 | ||
|nearest_unigene=Hs.731723 | |nearest_unigene=Hs.731723 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=224565325 | |start=224565325 | ||
|start_of_center_position=224565325 | |start_of_center_position=224565325 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000492470 | + | |transcript_name=ENST00000492470.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_224103.1 | |tss_id=hg_224103.1 | ||
Revision as of 09:12, 17 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 224565325 |
|---|---|
| End of the center position in the TSS region: | 224565326 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000492470.1 |
|---|---|
| Distance: | 39 |
| Num_trans: | 1 |
| All_trans: | ENST00000492470.1:39 |
TATA-Box annotation
| Distance to TSS: | -50991 |
|---|---|
| Nearest PromoterID: | NM_152495 |
| Entrez ID: | 149111 |
| Nearest Unigene: | Hs.731723 |
| Nearest Refseq: | NM_152495 |
| Nearest Ensembl: | ENSG00000143786 |
| Gene Name: | cornichon family AMPA receptor auxiliary protein 3 |
| Gene Alias: | CNIH-3 |
| Gene Description: | cornichon family AMPA receptor auxiliary protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
