Difference between revisions of "TSS:Hg 224191.1"
From referenceTSS
| Line 2: | Line 2: | ||
|BS69= | |BS69= | ||
|MRD30= | |MRD30= | ||
| − | |all_trans=ENST00000381591.5:0 | + | |all_trans=ENST00000381591.5:0 NM_001370114:167 NM_001370111:167 NM_001370110:167 NM_001370099:167 NM_001370108:167 AK294469:-266 AK294781:-266 NM_001330057:-268 NM_001370124:-268 NM_001370122:-268 NM_001202465:-268 NM_001202466:-268 NM_001370120:-268 NM_001370116:-268 NM_001370115:-268 NM_001370113:-268 NM_001370098:-268 NM_001370107:-268 NM_001370097:-268 NM_001370106:-268 NM_212479:-268 AK312570:-340 ENST00000381604.9:357 NM_001370121:357 NM_001370123:357 NM_001202464:357 NM_001370117:357 NM_001370112:357 NM_001370100:357 ENST00000509513.6:-365 BC034784:-365 ENST00000602682.6:374 ENST00000403354.5:386 ENST00000381607.8:386 BC091489:386 ENST00000627286.2:410 ENST00000402736.5:411 ENST00000397955.7:421 NM_001370101:500 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-182 |
|end=135098 | |end=135098 | ||
|end_of_center_position=135083 | |end_of_center_position=135083 | ||
|entrez_id=10771 | |entrez_id=10771 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
| − | |gene_alias=BRAM1 | + | |gene_alias=BRAM1{{!}}BS69{{!}}MRD30 |
|gene_description=zinc finger MYND-type containing 11 | |gene_description=zinc finger MYND-type containing 11 | ||
|gene_id=10771 | |gene_id=10771 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:16966 | |hgnc_mgi_id=HGNC:16966 | ||
|nearest_ensembl=ENSG00000015171 | |nearest_ensembl=ENSG00000015171 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001370114 |
|nearest_refseq=NM_006624 | |nearest_refseq=NM_006624 | ||
|nearest_unigene=Hs.292265 | |nearest_unigene=Hs.292265 | ||
| − | |num_trans= | + | |num_trans=40 |
|species=human | |species=human | ||
|start=135067 | |start=135067 | ||
|start_of_center_position=135082 | |start_of_center_position=135082 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000381591.5 | + | |transcript_name=ENST00000381591.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_224191.1 | |tss_id=hg_224191.1 | ||
Revision as of 09:15, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 135082 |
|---|---|
| End of the center position in the TSS region: | 135083 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000381591.5 |
|---|---|
| Distance: | 0 |
| Num_trans: | 40 |
| All_trans: | ENST00000381591.5:0 NM_001370114:167 NM_001370111:167 NM_001370110:167 NM_001370099:167 NM_001370108:167 AK294469:-266 AK294781:-266 NM_001330057:-268 NM_001370124:-268 NM_001370122:-268 NM_001202465:-268 NM_001202466:-268 NM_001370120:-268 NM_001370116:-268 NM_001370115:-268 NM_001370113:-268 NM_001370098:-268 NM_001370107:-268 NM_001370097:-268 NM_001370106:-268 NM_212479:-268 AK312570:-340 ENST00000381604.9:357 NM_001370121:357 NM_001370123:357 NM_001202464:357 NM_001370117:357 NM_001370112:357 NM_001370100:357 ENST00000509513.6:-365 BC034784:-365 ENST00000602682.6:374 ENST00000403354.5:386 ENST00000381607.8:386 BC091489:386 ENST00000627286.2:410 ENST00000402736.5:411 ENST00000397955.7:421 NM_001370101:500 |
TATA-Box annotation
| Distance to TSS: | -182 |
|---|---|
| Nearest PromoterID: | NM_001370114 |
| Entrez ID: | 10771 |
| Nearest Unigene: | Hs.292265 |
| Nearest Refseq: | NM_006624 |
| Nearest Ensembl: | ENSG00000015171 |
| Gene Name: | zinc finger MYND-type containing 11 |
| Gene Alias: | BRAM1|BS69|MRD30 |
| Gene Description: | zinc finger MYND-type containing 11 |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
