Difference between revisions of "TSS:Hg 224266.1"
From referenceTSS
| Line 2: | Line 2: | ||
|CAVB2= | |CAVB2= | ||
|MYSB= | |MYSB= | ||
| − | |all_trans= | + | |all_trans=AF465485:9 AF137377:17 AF423189:18 ENST00000651896.1:-25 ENST00000377331.8:-25 ENST00000377319.8:-156 AK307800:-156 ENST00000615785.4:-467 ENST00000617363.4:-467 ENST00000396576.6:-467 U95019:-467 AB208917:-467 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
|distance=9 | |distance=9 | ||
| − | |distance_to_tss= | + | |distance_to_tss=522 |
|end=18261252 | |end=18261252 | ||
|end_of_center_position=18261244 | |end_of_center_position=18261244 | ||
|entrez_id=783 | |entrez_id=783 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
| − | |gene_alias=CACNLB2 | + | |gene_alias=CACNLB2{{!}}CAVB2{{!}}MYSB |
|gene_description=calcium voltage-gated channel auxiliary subunit beta 2 | |gene_description=calcium voltage-gated channel auxiliary subunit beta 2 | ||
|gene_id=783 | |gene_id=783 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_000724 | |nearest_refseq=NM_000724 | ||
|nearest_unigene=Hs.59093 | |nearest_unigene=Hs.59093 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=18261235 | |start=18261235 | ||
|start_of_center_position=18261243 | |start_of_center_position=18261243 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AF465485 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_224266.1 | |tss_id=hg_224266.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 09:16, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 18261243 |
|---|---|
| End of the center position in the TSS region: | 18261244 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AF465485 |
|---|---|
| Distance: | 9 |
| Num_trans: | 12 |
| All_trans: | AF465485:9 AF137377:17 AF423189:18 ENST00000651896.1:-25 ENST00000377331.8:-25 ENST00000377319.8:-156 AK307800:-156 ENST00000615785.4:-467 ENST00000617363.4:-467 ENST00000396576.6:-467 U95019:-467 AB208917:-467 |
TATA-Box annotation
| Distance to TSS: | 522 |
|---|---|
| Nearest PromoterID: | NM_000724 |
| Entrez ID: | 783 |
| Nearest Unigene: | Hs.59093 |
| Nearest Refseq: | NM_000724 |
| Nearest Ensembl: | ENSG00000165995 |
| Gene Name: | calcium voltage-gated channel auxiliary subunit beta 2 |
| Gene Alias: | CACNLB2|CAVB2|MYSB |
| Gene Description: | calcium voltage-gated channel auxiliary subunit beta 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
