Difference between revisions of "TSS:Hg 224335.1"
From referenceTSS
| Line 2: | Line 2: | ||
|ANXA8L2= | |ANXA8L2= | ||
|VAC-beta= | |VAC-beta= | ||
| − | |all_trans=ENST00000584982.7:3 ENST00000613703.4:3 | + | |all_trans=ENST00000584982.7:3 ENST00000613703.4:3 ENST00000622769.4:52 BC008813:52 AK313626:103 X16662:123 ENST00000616785.1:128 BC021910:128 ENST00000611655.1:132 AK300191:132 ENST00000620353.1:152 ENST00000619162.5:152 NM_001098845:152 NM_001278923:152 NM_001278924:152 AK307182:152 AK223149:152 KJ905685:228 CU679125:228 |
|bA145E20.2= | |bA145E20.2= | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance=3 | |distance=3 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-154 |
|end=46375624 | |end=46375624 | ||
|end_of_center_position=46375622 | |end_of_center_position=46375622 | ||
|entrez_id=728113 | |entrez_id=728113 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
| − | |gene_alias=ANXA8 | + | |gene_alias=ANXA8{{!}}ANXA8L2{{!}}VAC-beta{{!}}bA145E20.2 |
| − | |gene_description=annexin A8 | + | |gene_description=annexin A8 like 1 |
|gene_id=728113 | |gene_id=728113 | ||
| − | |gene_name=annexin A8 | + | |gene_name=annexin A8 like 1 |
|gene_source=HGNC:23334 | |gene_source=HGNC:23334 | ||
|gene_symbol=ANXA8L1 | |gene_symbol=ANXA8L1 | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=HGNC:23334 | |hgnc_mgi_id=HGNC:23334 | ||
|nearest_ensembl=ENSG00000264230 | |nearest_ensembl=ENSG00000264230 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001278924 |
|nearest_refseq=NM_001630 | |nearest_refseq=NM_001630 | ||
|nearest_unigene=Hs.705389 | |nearest_unigene=Hs.705389 | ||
| − | |num_trans= | + | |num_trans=19 |
|species=human | |species=human | ||
|start=46375619 | |start=46375619 | ||
|start_of_center_position=46375621 | |start_of_center_position=46375621 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000584982.7 ENST00000613703.4 | + | |transcript_name=ENST00000584982.7 ENST00000613703.4 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_224335.1 | |tss_id=hg_224335.1 | ||
Revision as of 09:18, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 46375621 |
|---|---|
| End of the center position in the TSS region: | 46375622 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000584982.7 ENST00000613703.4 |
|---|---|
| Distance: | 3 |
| Num_trans: | 19 |
| All_trans: | ENST00000584982.7:3 ENST00000613703.4:3 ENST00000622769.4:52 BC008813:52 AK313626:103 X16662:123 ENST00000616785.1:128 BC021910:128 ENST00000611655.1:132 AK300191:132 ENST00000620353.1:152 ENST00000619162.5:152 NM_001098845:152 NM_001278923:152 NM_001278924:152 AK307182:152 AK223149:152 KJ905685:228 CU679125:228 |
TATA-Box annotation
| Distance to TSS: | -154 |
|---|---|
| Nearest PromoterID: | NM_001278924 |
| Entrez ID: | 728113 |
| Nearest Unigene: | Hs.705389 |
| Nearest Refseq: | NM_001630 |
| Nearest Ensembl: | ENSG00000264230 |
| Gene Name: | annexin A8 like 1 |
| Gene Alias: | ANXA8|ANXA8L2|VAC-beta|bA145E20.2 |
| Gene Description: | annexin A8 like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
