Difference between revisions of "TSS:Hg 224377.1"
From referenceTSS
| Line 7: | Line 7: | ||
|HMSNR= | |HMSNR= | ||
|HXK1= | |HXK1= | ||
| − | |all_trans=ENST00000359426. | + | |all_trans=ENST00000359426.7:40 NM_001322367:40 NM_000188:40 AK292012:40 AK294428:43 AB209526:44 ENST00000493591.6:46 M75126:60 AK309904:65 BC008730:85 DQ896762:136 DQ893281:136 CU679065:139 AB384968:140 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| − | |distance= | + | |distance=40 |
|distance_to_tss=-55 | |distance_to_tss=-55 | ||
|end=69318807 | |end=69318807 | ||
| Line 16: | Line 16: | ||
|entrez_id=3098 | |entrez_id=3098 | ||
|gc_percent=0.781095 | |gc_percent=0.781095 | ||
| − | |gene_alias=HK | + | |gene_alias=HK{{!}}HK1-ta{{!}}HK1-tb{{!}}HK1-tc{{!}}HKD{{!}}HKI{{!}}HMSNR{{!}}HXK1{{!}}RP79{{!}}hexokinase |
|gene_description=hexokinase 1 | |gene_description=hexokinase 1 | ||
|gene_id=3098 | |gene_id=3098 | ||
| Line 27: | Line 27: | ||
|hgnc_mgi_id=HGNC:4922 | |hgnc_mgi_id=HGNC:4922 | ||
|nearest_ensembl=ENSG00000156515 | |nearest_ensembl=ENSG00000156515 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_000188 |
|nearest_refseq=NM_000188 | |nearest_refseq=NM_000188 | ||
|nearest_unigene=Hs.370365 | |nearest_unigene=Hs.370365 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=69318776 | |start=69318776 | ||
|start_of_center_position=69318791 | |start_of_center_position=69318791 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000359426. | + | |transcript_name=ENST00000359426.7 NM_001322367 NM_000188 AK292012 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_224377.1 | |tss_id=hg_224377.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=P19367 | + | |uniprot_id=A8K7J7 P19367 Q59FD4 |
}} | }} | ||
Revision as of 09:19, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 69318791 |
|---|---|
| End of the center position in the TSS region: | 69318792 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000359426.7 NM_001322367 NM_000188 AK292012 |
|---|---|
| Distance: | 40 |
| Num_trans: | 14 |
| All_trans: | ENST00000359426.7:40 NM_001322367:40 NM_000188:40 AK292012:40 AK294428:43 AB209526:44 ENST00000493591.6:46 M75126:60 AK309904:65 BC008730:85 DQ896762:136 DQ893281:136 CU679065:139 AB384968:140 |
TATA-Box annotation
| Distance to TSS: | -55 |
|---|---|
| Nearest PromoterID: | NM_000188 |
| Entrez ID: | 3098 |
| Nearest Unigene: | Hs.370365 |
| Nearest Refseq: | NM_000188 |
| Nearest Ensembl: | ENSG00000156515 |
| Gene Name: | hexokinase 1 |
| Gene Alias: | HK|HK1-ta|HK1-tb|HK1-tc|HKD|HKI|HMSNR|HXK1|RP79|hexokinase |
| Gene Description: | hexokinase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
