Difference between revisions of "TSS:Hg 224448.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000424428.1:-6 NR_038330:-6 | + | |all_trans=ENST00000424428.1:-6 NR_038330:-6 BC021189:-6 ENST00000669265.1:8 ENST00000661744.1:15 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_038330 | |nearest_refseq=NR_038330 | ||
|nearest_unigene=Hs.568878 | |nearest_unigene=Hs.568878 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
|start=97102761 | |start=97102761 | ||
|start_of_center_position=97102762 | |start_of_center_position=97102762 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-17(GCTTATATACAG,+,0.00) |
| − | |transcript_name=ENST00000424428.1 NR_038330 | + | |transcript_name=ENST00000424428.1 NR_038330 BC021189 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_224448.1 | |tss_id=hg_224448.1 | ||
Revision as of 09:21, 17 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 97102762 |
|---|---|
| End of the center position in the TSS region: | 97102763 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000424428.1 NR_038330 BC021189 |
|---|---|
| Distance: | -6 |
| Num_trans: | 5 |
| All_trans: | ENST00000424428.1:-6 NR_038330:-6 BC021189:-6 ENST00000669265.1:8 ENST00000661744.1:15 |
TATA-Box annotation
| Distance to TSS: | 7 |
|---|---|
| Nearest PromoterID: | NR_038330 |
| Entrez ID: | 100505540 |
| Nearest Unigene: | Hs.568878 |
| Nearest Refseq: | NR_038330 |
| Nearest Ensembl: | ENSG00000234855 |
| Gene Name: | SLIT1 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | SLIT1 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -17(GCTTATATACAG,+,0.00) |
