Difference between revisions of "TSS:Hg 230302.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|GCS1L= | |GCS1L= | ||
| − | |all_trans=NM_006869:- | + | |all_trans=ENST00000265846.10:-20 NM_006869:-20 AB097049:29 AF082324:29 ENST00000649206.1:-37 BC033747:176 AB587419:180 KJ898337:182 AJ006422:-260 |
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.19 | |cpg_percent=0.19 | ||
| − | |distance=- | + | |distance=-20 |
| − | |distance_to_tss= | + | |distance_to_tss=20 |
|end=954660 | |end=954660 | ||
|end_of_center_position=954660 | |end_of_center_position=954660 | ||
|entrez_id=11033 | |entrez_id=11033 | ||
|gc_percent=0.835821 | |gc_percent=0.835821 | ||
| − | |gene_alias=CENTA1 | + | |gene_alias=CENTA1{{!}}GCS1L{{!}}p42IP4 |
|gene_description=ArfGAP with dual PH domains 1 | |gene_description=ArfGAP with dual PH domains 1 | ||
|gene_id=11033 | |gene_id=11033 | ||
| Line 29: | Line 29: | ||
|start_of_center_position=954659 | |start_of_center_position=954659 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_006869 | + | |transcript_name=ENST00000265846.10 NM_006869 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_230302.1 | |tss_id=hg_230302.1 | ||
Revision as of 11:35, 17 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 954659 |
|---|---|
| End of the center position in the TSS region: | 954660 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000265846.10 NM_006869 |
|---|---|
| Distance: | -20 |
| Num_trans: | 9 |
| All_trans: | ENST00000265846.10:-20 NM_006869:-20 AB097049:29 AF082324:29 ENST00000649206.1:-37 BC033747:176 AB587419:180 KJ898337:182 AJ006422:-260 |
TATA-Box annotation
| Distance to TSS: | 20 |
|---|---|
| Nearest PromoterID: | NM_006869 |
| Entrez ID: | 11033 |
| Nearest Unigene: | Hs.602573 |
| Nearest Refseq: | NM_006869 |
| Nearest Ensembl: | ENSG00000105963 |
| Gene Name: | ArfGAP with dual PH domains 1 |
| Gene Alias: | CENTA1|GCS1L|p42IP4 |
| Gene Description: | ArfGAP with dual PH domains 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.19 |
| GC%: | 0.835821 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
