Difference between revisions of "TSS:Hg 231610.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AB011126:-6 | + | |all_trans=AB011126:-6 AF265550:-20 ENST00000355681.3:-25 AK023681:-25 BC062463:29 ENST00000446176.7:-47 NM_015033:-47 NM_001363755:-47 ENST00000443566.6:-52 ENST00000420781.5:-52 BC101755:102 BC143513:102 BC143515:102 BC143514:102 AB383906:161 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
|distance=-6 | |distance=-6 | ||
| − | |distance_to_tss= | + | |distance_to_tss=49 |
|end=130043142 | |end=130043142 | ||
|end_of_center_position=130043140 | |end_of_center_position=130043140 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_015033 | |nearest_refseq=NM_015033 | ||
|nearest_unigene=Hs.189409 | |nearest_unigene=Hs.189409 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=human | |species=human | ||
|start=130043137 | |start=130043137 | ||
Revision as of 12:05, 17 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 130043139 |
|---|---|
| End of the center position in the TSS region: | 130043140 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AB011126 |
|---|---|
| Distance: | -6 |
| Num_trans: | 15 |
| All_trans: | AB011126:-6 AF265550:-20 ENST00000355681.3:-25 AK023681:-25 BC062463:29 ENST00000446176.7:-47 NM_015033:-47 NM_001363755:-47 ENST00000443566.6:-52 ENST00000420781.5:-52 BC101755:102 BC143513:102 BC143515:102 BC143514:102 AB383906:161 |
TATA-Box annotation
| Distance to TSS: | 49 |
|---|---|
| Nearest PromoterID: | NM_015033 |
| Entrez ID: | 23048 |
| Nearest Unigene: | Hs.189409 |
| Nearest Refseq: | NM_015033 |
| Nearest Ensembl: | ENSG00000187239 |
| Gene Name: | formin binding protein 1 |
| Gene Alias: | FBP17 |
| Gene Description: | formin binding protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.771144 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
