Difference between revisions of "TSS:Hg 231620.1"
From referenceTSS
| Line 2: | Line 2: | ||
|RGF= | |RGF= | ||
|RalGEF= | |RalGEF= | ||
| − | |all_trans=BC059362:-14 NM_006266:- | + | |all_trans=BC059362:-14 ENST00000372050.8:-15 NM_006266:-15 NM_001271776:-15 ENST00000372047.7:47 AF295773:58 ENST00000493438.5:67 AK074114:67 GQ129266:67 GQ129265:67 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
|distance=-14 | |distance=-14 | ||
| − | |distance_to_tss= | + | |distance_to_tss=16 |
|end=133121225 | |end=133121225 | ||
|end_of_center_position=133121224 | |end_of_center_position=133121224 | ||
|entrez_id=5900 | |entrez_id=5900 | ||
|gc_percent=0.825871 | |gc_percent=0.825871 | ||
| − | |gene_alias=RGDS | + | |gene_alias=RGDS{{!}}RGF{{!}}RalGEF |
|gene_description=ral guanine nucleotide dissociation stimulator | |gene_description=ral guanine nucleotide dissociation stimulator | ||
|gene_id=5900 | |gene_id=5900 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:9842 | |hgnc_mgi_id=HGNC:9842 | ||
|nearest_ensembl=ENSG00000160271 | |nearest_ensembl=ENSG00000160271 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001271776 |
|nearest_refseq=NM_006266 | |nearest_refseq=NM_006266 | ||
|nearest_unigene=Hs.106185 | |nearest_unigene=Hs.106185 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=133121222 | |start=133121222 | ||
Revision as of 12:05, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 133121223 |
|---|---|
| End of the center position in the TSS region: | 133121224 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC059362 |
|---|---|
| Distance: | -14 |
| Num_trans: | 10 |
| All_trans: | BC059362:-14 ENST00000372050.8:-15 NM_006266:-15 NM_001271776:-15 ENST00000372047.7:47 AF295773:58 ENST00000493438.5:67 AK074114:67 GQ129266:67 GQ129265:67 |
TATA-Box annotation
| Distance to TSS: | 16 |
|---|---|
| Nearest PromoterID: | NM_001271776 |
| Entrez ID: | 5900 |
| Nearest Unigene: | Hs.106185 |
| Nearest Refseq: | NM_006266 |
| Nearest Ensembl: | ENSG00000160271 |
| Gene Name: | ral guanine nucleotide dissociation stimulator |
| Gene Alias: | RGDS|RGF|RalGEF |
| Gene Description: | ral guanine nucleotide dissociation stimulator |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.825871 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
