Difference between revisions of "TSS:Hg 232069.1"
From referenceTSS
| Line 6: | Line 6: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=20 |
|end=102152409 | |end=102152409 | ||
|end_of_center_position=102245562 | |end_of_center_position=102245562 | ||
|entrez_id=9221 | |entrez_id=9221 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
| − | |gene_alias=NOPP130 | + | |gene_alias=NOPP130{{!}}NOPP140{{!}}NS5ATP13{{!}}P130 |
|gene_description=nucleolar and coiled-body phosphoprotein 1 | |gene_description=nucleolar and coiled-body phosphoprotein 1 | ||
|gene_id=9221 | |gene_id=9221 | ||
| − | |gene_name= | + | |gene_name=NOLC1 |
|gene_source=HGNC:15608 | |gene_source=HGNC:15608 | ||
|gene_symbol=NOLC1 | |gene_symbol=NOLC1 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_004741 | |nearest_refseq=NM_004741 | ||
|nearest_unigene=Hs.523238 | |nearest_unigene=Hs.523238 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
|start=102152408 | |start=102152408 | ||
|start_of_center_position=102245561 | |start_of_center_position=102245561 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232069.1 | |tss_id=hg_232069.1 | ||
Revision as of 12:16, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 102245561 |
|---|---|
| End of the center position in the TSS region: | 102245562 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | ENST00000461421.5:0 uc057vpd.1:0 DQ891862:1 DQ895051:1 AB383719:2 AY820769:2 ENST00000476468.5:4 uc057vpe.1:4 ENST00000488254.6:-5 ENST00000603946.5:-5 uc001kuq.4:-5 uc057vpc.1:-5 BC001883:-5 BC006769:-5 ENST00000370007.5:6 uc057vpf.1:6 D21262:6 ENST00000464969.6:-14 uc057vpb.1:-14 AK056755:-14 AK225101:-20 AK314363:-20 Z34289:-49 ENST00000605788.5:-233 ENST00000405356.5:-233 NM_001284388:-233 NM_001284389:-233 NM_004741:-233 uc001kuo.4:-233 uc001kup.3:-233 |
TATA-Box annotation
| Distance to TSS: | 20 |
|---|---|
| Nearest PromoterID: | NM_001284389 |
| Entrez ID: | 9221 |
| Nearest Unigene: | Hs.523238 |
| Nearest Refseq: | NM_004741 |
| Nearest Ensembl: | ENSG00000166197 |
| Gene Name: | NOLC1 |
| Gene Alias: | NOPP130|NOPP140|NS5ATP13|P130 |
| Gene Description: | nucleolar and coiled-body phosphoprotein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
