Difference between revisions of "TSS:Hg 232237.1"
From referenceTSS
| Line 3: | Line 3: | ||
|PFK-P= | |PFK-P= | ||
|PFKF= | |PFKF= | ||
| + | |all_trans=ENST00000677351.1:-12 ENST00000678206.1:-12 ENST00000381075.7:-29 ENST00000678089.1:112 NM_001323072:112 NM_001242339:112 AK092597:112 ENST00000676796.1:226 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance= | + | |distance=-12 |
| − | |distance_to_tss= | + | |distance_to_tss=68787 |
|end=2998153 | |end=2998153 | ||
|end_of_center_position=3068515 | |end_of_center_position=3068515 | ||
| − | |entrez_id= | + | |entrez_id=101927824 |
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=uncharacterized LOC101927824 |
| − | | | + | |gene_id=5214 |
| − | |gene_type= | + | |gene_name=phosphofructokinase, platelet |
| − | |nearest_ensembl= | + | |gene_source=HGNC:8878 |
| − | |nearest_promoter_id= | + | |gene_symbol=PFKP |
| − | |nearest_refseq= | + | |gene_synonyms=PFK-C PFKF |
| − | |nearest_unigene= | + | |gene_type=ncRNA |
| − | |num_trans= | + | |hgnc_mgi_id=HGNC:8878 |
| + | |nearest_ensembl= | ||
| + | |nearest_promoter_id=NR_160682 | ||
| + | |nearest_refseq=NR_160681 | ||
| + | |nearest_unigene= | ||
| + | |num_trans=8 | ||
|species=human | |species=human | ||
|start=2998138 | |start=2998138 | ||
|start_of_center_position=3068514 | |start_of_center_position=3068514 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000677351.1 ENST00000678206.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_232237.1 | |tss_id=hg_232237.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 12:19, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 3068514 |
|---|---|
| End of the center position in the TSS region: | 3068515 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000677351.1 ENST00000678206.1 |
|---|---|
| Distance: | -12 |
| Num_trans: | 8 |
| All_trans: | ENST00000677351.1:-12 ENST00000678206.1:-12 ENST00000381075.7:-29 ENST00000678089.1:112 NM_001323072:112 NM_001242339:112 AK092597:112 ENST00000676796.1:226 |
TATA-Box annotation
| Distance to TSS: | 68787 |
|---|---|
| Nearest PromoterID: | NR_160682 |
| Entrez ID: | 101927824 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_160681 |
| Nearest Ensembl: | |
| Gene Name: | phosphofructokinase, platelet |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC101927824 |
| Gene Type: | ncRNA |
| CpG%: | 0.03 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
