Difference between revisions of "TSS:Hg 232248.1"
From referenceTSS
| Line 4: | Line 4: | ||
|KNS1= | |KNS1= | ||
|UKHC= | |UKHC= | ||
| + | |all_trans=ENST00000375025.10:-16 AK023093:-16 ENST00000639290.1:97 ENST00000302316.12:97 BC125090:97 BC125091:97 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| − | |distance= | + | |distance=-16 |
| − | |distance_to_tss= | + | |distance_to_tss=224 |
|end=32056207 | |end=32056207 | ||
|end_of_center_position=32567739 | |end_of_center_position=32567739 | ||
|entrez_id=3799 | |entrez_id=3799 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=HEL-S-61 | + | |gene_alias=HEL-S-61{{!}}KINH{{!}}KNS{{!}}KNS1{{!}}UKHC |
|gene_description=kinesin family member 5B | |gene_description=kinesin family member 5B | ||
| − | |gene_name= | + | |gene_id=79741 |
| + | |gene_name=coiled-coil domain containing 7 | ||
| + | |gene_source=HGNC:26533 | ||
| + | |gene_symbol=CCDC7 | ||
| + | |gene_synonyms=BIOT2 FLJ13031 FLJ32762 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:26533 | ||
|nearest_ensembl=ENSG00000170759 | |nearest_ensembl=ENSG00000170759 | ||
|nearest_promoter_id=NM_004521 | |nearest_promoter_id=NM_004521 | ||
|nearest_refseq=NM_004521 | |nearest_refseq=NM_004521 | ||
|nearest_unigene=Hs.327736 | |nearest_unigene=Hs.327736 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=32056194 | |start=32056194 | ||
|start_of_center_position=32567738 | |start_of_center_position=32567738 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000375025.10 AK023093 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232248.1 | |tss_id=hg_232248.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=A0A1B0GWZ1 | ||
}} | }} | ||
Revision as of 12:20, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 32567738 |
|---|---|
| End of the center position in the TSS region: | 32567739 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000375025.10 AK023093 |
|---|---|
| Distance: | -16 |
| Num_trans: | 6 |
| All_trans: | ENST00000375025.10:-16 AK023093:-16 ENST00000639290.1:97 ENST00000302316.12:97 BC125090:97 BC125091:97 |
TATA-Box annotation
| Distance to TSS: | 224 |
|---|---|
| Nearest PromoterID: | NM_004521 |
| Entrez ID: | 3799 |
| Nearest Unigene: | Hs.327736 |
| Nearest Refseq: | NM_004521 |
| Nearest Ensembl: | ENSG00000170759 |
| Gene Name: | coiled-coil domain containing 7 |
| Gene Alias: | HEL-S-61|KINH|KNS|KNS1|UKHC |
| Gene Description: | kinesin family member 5B |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
