Difference between revisions of "TSS:Hg 232270.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|BMS1L= | |BMS1L= | ||
| − | |all_trans= | + | |all_trans=LF354628:212 MA590205:212 LF330971:212 MA566548:212 LF319157:214 MA554734:214 CU677700:-278 CU678643:-278 CU674703:-278 LF211474:-364 MA447051:-364 LF330972:438 MA566549:438 LF354629:439 MA590206:439 LF319156:441 MA554733:441 LF319158:-485 MA554735:-485 LF330970:-487 MA566547:-487 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| − | |distance= | + | |distance=212 |
| − | |distance_to_tss=- | + | |distance_to_tss=-317 |
|end=42782478 | |end=42782478 | ||
|end_of_center_position=43386924 | |end_of_center_position=43386924 | ||
|entrez_id=9790 | |entrez_id=9790 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| − | |gene_alias=ACC | + | |gene_alias=ACC{{!}}BMS1L |
| − | |gene_description= | + | |gene_description=BMS1 ribosome biogenesis factor |
|gene_id=9790 | |gene_id=9790 | ||
| − | |gene_name= | + | |gene_name=BMS1 |
|gene_source=HGNC:23505 | |gene_source=HGNC:23505 | ||
|gene_symbol=BMS1 | |gene_symbol=BMS1 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_014753 | |nearest_refseq=NM_014753 | ||
|nearest_unigene=Hs.10848 | |nearest_unigene=Hs.10848 | ||
| − | |num_trans= | + | |num_trans=21 |
|species=human | |species=human | ||
|start=42782477 | |start=42782477 | ||
|start_of_center_position=43386923 | |start_of_center_position=43386923 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF354628 MA590205 LF330971 MA566548 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232270.1 | |tss_id=hg_232270.1 | ||
Revision as of 12:20, 17 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 43386923 |
|---|---|
| End of the center position in the TSS region: | 43386924 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF354628 MA590205 LF330971 MA566548 |
|---|---|
| Distance: | 212 |
| Num_trans: | 21 |
| All_trans: | LF354628:212 MA590205:212 LF330971:212 MA566548:212 LF319157:214 MA554734:214 CU677700:-278 CU678643:-278 CU674703:-278 LF211474:-364 MA447051:-364 LF330972:438 MA566549:438 LF354629:439 MA590206:439 LF319156:441 MA554733:441 LF319158:-485 MA554735:-485 LF330970:-487 MA566547:-487 |
TATA-Box annotation
| Distance to TSS: | -317 |
|---|---|
| Nearest PromoterID: | NM_014753 |
| Entrez ID: | 9790 |
| Nearest Unigene: | Hs.10848 |
| Nearest Refseq: | NM_014753 |
| Nearest Ensembl: | ENSG00000165733 |
| Gene Name: | BMS1 |
| Gene Alias: | ACC|BMS1L |
| Gene Description: | BMS1 ribosome biogenesis factor |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
