Difference between revisions of "TSS:Hg 232364.1"
From referenceTSS
| Line 4: | Line 4: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| − | |distance= | + | |distance=NA |
|distance_to_tss=142 | |distance_to_tss=142 | ||
|end=71812025 | |end=71812025 | ||
| Line 10: | Line 10: | ||
|entrez_id=64072 | |entrez_id=64072 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=CDHR23 | + | |gene_alias=CDHR23{{!}}PITA5{{!}}USH1D |
|gene_description=cadherin related 23 | |gene_description=cadherin related 23 | ||
|gene_id=64072 | |gene_id=64072 | ||
| − | |gene_name= | + | |gene_name=CDH23 |
|gene_source=HGNC:13733 | |gene_source=HGNC:13733 | ||
|gene_symbol=CDH23 | |gene_symbol=CDH23 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_022124 | |nearest_refseq=NM_022124 | ||
|nearest_unigene=Hs.656032 | |nearest_unigene=Hs.656032 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
|start=71812024 | |start=71812024 | ||
|start_of_center_position=72273949 | |start_of_center_position=72273949 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_232364.1 | |tss_id=hg_232364.1 | ||
Revision as of 12:22, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 72273949 |
|---|---|
| End of the center position in the TSS region: | 72273950 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | NM_001171936:-142 NM_001171935:-142 AY563161:-142 AY563162:-142 |
TATA-Box annotation
| Distance to TSS: | 142 |
|---|---|
| Nearest PromoterID: | NM_001171936 |
| Entrez ID: | 64072 |
| Nearest Unigene: | Hs.656032 |
| Nearest Refseq: | NM_022124 |
| Nearest Ensembl: | ENSG00000107736 |
| Gene Name: | CDH23 |
| Gene Alias: | CDHR23|PITA5|USH1D |
| Gene Description: | cadherin related 23 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
