Difference between revisions of "TSS:Hg 232398.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|PP14776= | |PP14776= | ||
| + | |all_trans=BC003149:0 ENST00000466129.6:-1 ENST00000465692.2:1 BC000523:-4 AF147330:-8 BC071926:-9 ENST00000476545.6:-10 ENST00000645698.1:-13 BX647260:-13 ENST00000475468.6:14 BX537975:-22 M31520:-22 ENST00000478655.6:-24 ENST00000485708.7:-24 ENST00000464716.6:-24 ENST00000360830.9:-24 ENST00000372360.9:-24 ENST00000440692.6:-24 NM_001142285:-24 NM_033022:-24 D28424:-24 AK311776:-24 AK311910:-24 ENST00000482069.5:27 ENST00000645440.1:-51 ENST00000435275.5:-127 ENST00000613865.5:-127 NM_001026:-127 NM_001142283:-127 NM_001142284:-127 NM_001142282:-127 ENST00000646254.1:320 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=-21159 | |distance_to_tss=-21159 | ||
|end=7640835 | |end=7640835 | ||
| Line 9: | Line 10: | ||
|entrez_id=80760 | |entrez_id=80760 | ||
|gc_percent=0.383085 | |gc_percent=0.383085 | ||
| − | |gene_alias=ITI-HC5 | + | |gene_alias=ITI-HC5{{!}}PP14776 |
| − | |gene_description=inter-alpha-trypsin inhibitor heavy chain | + | |gene_description=inter-alpha-trypsin inhibitor heavy chain 5 |
| − | |gene_name= | + | |gene_id=6229 |
| + | |gene_name=ribosomal protein S24 | ||
| + | |gene_source=HGNC:10411 | ||
| + | |gene_symbol=RPS24 | ||
| + | |gene_synonyms=S24 eS24 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10411 | ||
|nearest_ensembl=ENSG00000123243 | |nearest_ensembl=ENSG00000123243 | ||
|nearest_promoter_id=NM_032817 | |nearest_promoter_id=NM_032817 | ||
|nearest_refseq=NM_030569 | |nearest_refseq=NM_030569 | ||
|nearest_unigene=Hs.498586 | |nearest_unigene=Hs.498586 | ||
| − | |num_trans= | + | |num_trans=32 |
|species=human | |species=human | ||
|start=7640828 | |start=7640828 | ||
|start_of_center_position=78033888 | |start_of_center_position=78033888 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=BC003149 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_232398.1 | |tss_id=hg_232398.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 12:23, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 78033888 |
|---|---|
| End of the center position in the TSS region: | 78033889 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC003149 |
|---|---|
| Distance: | 0 |
| Num_trans: | 32 |
| All_trans: | BC003149:0 ENST00000466129.6:-1 ENST00000465692.2:1 BC000523:-4 AF147330:-8 BC071926:-9 ENST00000476545.6:-10 ENST00000645698.1:-13 BX647260:-13 ENST00000475468.6:14 BX537975:-22 M31520:-22 ENST00000478655.6:-24 ENST00000485708.7:-24 ENST00000464716.6:-24 ENST00000360830.9:-24 ENST00000372360.9:-24 ENST00000440692.6:-24 NM_001142285:-24 NM_033022:-24 D28424:-24 AK311776:-24 AK311910:-24 ENST00000482069.5:27 ENST00000645440.1:-51 ENST00000435275.5:-127 ENST00000613865.5:-127 NM_001026:-127 NM_001142283:-127 NM_001142284:-127 NM_001142282:-127 ENST00000646254.1:320 |
TATA-Box annotation
| Distance to TSS: | -21159 |
|---|---|
| Nearest PromoterID: | NM_032817 |
| Entrez ID: | 80760 |
| Nearest Unigene: | Hs.498586 |
| Nearest Refseq: | NM_030569 |
| Nearest Ensembl: | ENSG00000123243 |
| Gene Name: | ribosomal protein S24 |
| Gene Alias: | ITI-HC5|PP14776 |
| Gene Description: | inter-alpha-trypsin inhibitor heavy chain 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.383085 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
