Difference between revisions of "TSS:Hg 232407.1"
From referenceTSS
| Line 4: | Line 4: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=25 |
|end=78033890 | |end=78033890 | ||
|end_of_center_position=7807661 | |end_of_center_position=7807661 | ||
|entrez_id=6229 | |entrez_id=6229 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| − | |gene_alias=DBA3 | + | |gene_alias=DBA3{{!}}S24{{!}}eS24 |
|gene_description=ribosomal protein S24 | |gene_description=ribosomal protein S24 | ||
|gene_id=6229 | |gene_id=6229 | ||
| − | |gene_name= | + | |gene_name=RPS24 |
|gene_source=HGNC:10411 | |gene_source=HGNC:10411 | ||
|gene_symbol=RPS24 | |gene_symbol=RPS24 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:10411 | |hgnc_mgi_id=HGNC:10411 | ||
|nearest_ensembl=ENSG00000138326 | |nearest_ensembl=ENSG00000138326 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001142285 |
|nearest_refseq=NM_001026 | |nearest_refseq=NM_001026 | ||
|nearest_unigene=Hs.280130 | |nearest_unigene=Hs.280130 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
|start=78033886 | |start=78033886 | ||
|start_of_center_position=7807660 | |start_of_center_position=7807660 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232407.1 | |tss_id=hg_232407.1 | ||
Revision as of 12:23, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 7807660 |
|---|---|
| End of the center position in the TSS region: | 7807661 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | BC003149:0 ENST00000466129.5:-1 uc057ukh.1:-1 ENST00000360830.8:-4 uc001jzp.4:-4 BC000523:-4 AF147330:-8 ENST00000476545.5:-9 uc057ukg.1:-9 BC071926:-9 ENST00000464716.5:-13 uc057ukf.1:-13 BX647260:-13 ENST00000475468.5:14 uc057uki.1:14 ENST00000372360.7:-22 uc001jzq.4:-22 BX537975:-22 M31520:-22 ENST00000478655.5:-24 uc057uke.1:-24 D28424:-24 AK311776:-24 AK311910:-24 ENST00000482069.5:27 uc057ukj.1:27 ENST00000485708.6:-43 uc057ukd.1:-43 ENST00000613865.4:-127 ENST00000435275.5:-127 ENST00000440692.5:-127 NM_001026:-127 NM_033022:-127 NM_001142285:-127 NM_001142284:-127 NM_001142283:-127 NM_001142282:-127 uc057ukb.1:-127 uc057ukc.1:-127 uc001jzs.4:-127 |
TATA-Box annotation
| Distance to TSS: | 25 |
|---|---|
| Nearest PromoterID: | NM_001142285 |
| Entrez ID: | 6229 |
| Nearest Unigene: | Hs.280130 |
| Nearest Refseq: | NM_001026 |
| Nearest Ensembl: | ENSG00000138326 |
| Gene Name: | RPS24 |
| Gene Alias: | DBA3|S24|eS24 |
| Gene Description: | ribosomal protein S24 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
