Difference between revisions of "TSS:Hg 232434.1"
From referenceTSS
| Line 3: | Line 3: | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss= | + | |distance_to_tss=-212 |
|end=80132518 | |end=80132518 | ||
|end_of_center_position=86680107 | |end_of_center_position=86680107 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description=placenta | + | |gene_description=placenta associated 9 |
|gene_id=219348 | |gene_id=219348 | ||
| − | |gene_name= | + | |gene_name=PLAC9 |
|gene_source=HGNC:19255 | |gene_source=HGNC:19255 | ||
|gene_symbol=PLAC9 | |gene_symbol=PLAC9 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001012973 | |nearest_refseq=NM_001012973 | ||
|nearest_unigene=Hs.204947 | |nearest_unigene=Hs.204947 | ||
| − | |num_trans= | + | |num_trans=0 |
|species=human | |species=human | ||
|start=80132517 | |start=80132517 | ||
|start_of_center_position=86680106 | |start_of_center_position=86680106 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name= |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232434.1 | |tss_id=hg_232434.1 | ||
Revision as of 12:24, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 86680106 |
|---|---|
| End of the center position in the TSS region: | 86680107 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: | NM_001012973:-16 BC066348:-16 BC090922:-16 ENST00000372267.6:73 uc057ums.1:73 BC117332:156 BC117334:156 ENST00000372263.3:203 uc001kbp.2:203 HQ258029:239 KJ895824:239 EU446996:241 |
TATA-Box annotation
| Distance to TSS: | -212 |
|---|---|
| Nearest PromoterID: | NM_001331125 |
| Entrez ID: | 219348 |
| Nearest Unigene: | Hs.204947 |
| Nearest Refseq: | NM_001012973 |
| Nearest Ensembl: | ENSG00000189129 |
| Gene Name: | PLAC9 |
| Gene Alias: | - |
| Gene Description: | placenta associated 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
